Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm996 ]


Position: chr3:35,302,616-35,305,632 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gm3143 - Gm6639

Timepoints:
e11.5

Expression Pattern
hindbrain (rhombencephalon) (9 out of 11 embryos) 
midbrain (mesencephalon) (9 out of 11 embryos) 
neural tube (9 out of 11 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 4

Embryo 5

Fasta sequence
CcCaTGGAAAACTGGGGCTGATACaggtctgtggccttaagaggccctatctgagccaca
caaattaagatccttgttgtagggcagttgacttcatgtacacatctccacatatggcta
tttttttttttaagatttacttattttctatataagtacactgtagctgacttcagatgt
accagaagagggcgtcagatccctttaagggtggttgtgagccaccatgtggttgctggg
atttgaacacaggaccttcggaagagcagtcggtgctcttacccactgagccacctcacc
agcccccacatatggctatttaccacagaaacaaagaagaagtcagatgcattttgatct
gatcttccattttccagtgcacagtacagcaaaaagaatttcattgacggttcttatctg
cctcgaaggcaaaagaccctaacacggacttgcagaaggccattataactaagtccagag
tggcttcttttcttcatggtgacaggcattgtgcctgactgctaagagaggaggccagag
gagggccagacaaagcaggcttgctctttctgaaggaaatttttatagatattatttggg
ggggggggggggagtaatcttcaaattctcaagttatttctcaacaggtgtagggttttt
tttgttttgttttgttttgattttttgttttgttgttttgttttgttttgttttggtcca
aagatccagaaggtccagactgttttatgtaatgtagatagacaaagtacaggggtatct
ctctgagactgctttatgtaaagccaccactttaaaagttcagtttaaatacttccaatg
agaaccagccccatcctcaaattctgtggacccttctgagctcccgctcacaatgggcca
tatagtttgttccttaacatacattaatttggctgtagcaagatcgaccctgtgtatctc
agccctctacttgaacaaagaagaaagcattcaattctcttccgtggcaaatttagcctt
gcactagtctgtcctgccactcatgcagggccctgccggagaaactgctttgcaaatgtt
ttgctgggttttgttgctaggtgatgagttaggaaactttgcaactcccgctgagaggtt
tttttttttttgtttttctgttttttttttttttttttttttttttttttggtttttttt
aagtgcctgtaaccactttcatattaaaaaggagagaaagatagggcagcctggcgttga
ttcctcaagatttactctttgctctctatttggcttagttgtcacagaaaaaaactggcc
tcttaagaaagcaaactcagagaaacagggagctagggagcaggcaagtagaggaggctg
cacacaggagcaaacaccctttgcgggagagatgggcttgaagctgcagtcagcttcaga
aaccctttgcctcaaccaacttccagccaaacagcaggggttcctgggaaagccccaggg
cctgtctgaggcccatcccgtgtcaatgattgatgaggaccagtgtgagaggtgacacac
tgtgaaatcagactgagtcacaaagagttaatccttgggcttcttccagaccactctttt
gaggggaaaaaataatatttatcccttcttttgttaattttgtatcgccgaaaagtaatc
ttgatattttactaaccaggcaagacgccttcaggaaacaaacacacactcccgttatgg
ttcccaacttatttggaatcgcttgctgatttagtaagtattgcgttgcaggcagtagag
aggtgagaagggttgtttctgagtataaattccttttcacacaatttaaaacttacctgt
caattacaaaggaaggagcagccctggacaaaagagcagcaacttaccacatttgggttt
tcttctcccaaacttggaaacagcttgggagtctctgtccttttgtgtcctttactaact
acttcactggtgctggtcccctgcggggccctctcctggcaggacacggaagggcagatg
tgtgctggacttggctccacggcagagtttctcgtgctttctcatcctccacagcagatg
cccaaactttagcagagtctctttaacacttcattaattattgagcagtgccaaaagtaa
ttattgggctatgcctggagtccttttctcccacatcagtaaacagtaatttagagaagg
ggggttataaccgtagggcgagaaccgtttccccccacagctgtgtggcgagggcaacaa
tgatgcgtatgtttcaacaaatgagaaccctcagcccagctctcgggctcagccggctct
cccgctcagcccgctctcgggcatacatgtagggaagttacaggcagtcatacagtccac
catgctcatcgtagcaggcaacttcaaatagttcacttgccaacaaatctgttctgactt
cgtgcttttgccctaacttaataataacaaaataatacctaaagccatcaggaaataagc
tccctgatacgttgcagtagaagccgggtaactttcaaatagcactttcccttaattagt
aaagagggtccccccccccttttgttattaccccatgaaacatcaattctcaccctgtct
tcaattcatggacattttttttcatagccacttgagaccctaagtgactccgggacttgg
caaaccagaagctgtttccatgtattttcaaagccaaacaaagagaaaagtcttgctgga
gcggggttcatctaaagccttgctacttgctcctctcgatgatgaggttagaagattata
tatacagtgcagtgcttttcctagatcacaggaggcttgaattctctccaagaggttccc
ctaaagtgagttattccggaactttttccatggaaggcagcacatctcctttaaaaacca
ctccctgttacaatgtggccagtgcttagttgtttaacctaatatcatgaaaatttgTAG
CCCCCAGCTTCTACTCA
Primer
(+)caccTGGAAAACTGGGGCTGATAC
(+)TGAGTAGAAGCTGGGGGCTA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.