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Mouse element [ mm995 ]


Position: chr5:132,299,744-132,302,297 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Auts2(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
tACaGGGAAAATGGAGACATTGCTtttttaaaaaaaaaaaaaaggttcatttttatgtga
atgagtgttttccctgaatgaatgaatgaatgaatgaatgaatgaatgtgtatgaggtgc
atgcttggtgcctatgaatgtcagagggatgaaggatctgctggaactgtagttacaaat
agatggttgtaagatgccacgagggtgcctagaatggaacccaggtactcttcaagagca
gttagccctttcagcaccaagccatctccttagtccctaccatctccacttgataacggc
gttaggtgtctgcttagaggctagcctgcccaccagttaatgccaaaccaagctctcagt
cctactgggctcccatgagaaactgtggagaactctgacatcatccacttggcatcccag
gggtttctctgtccatcaatgtcgagtgccaatgaatagagagaaggcctcagaactgag
ggctgctttccctgctgggtgagatctgggcaacagccatggcctacctagctgcctaca
gaggcgctggaactccatctctgtcatctttatgctcatggctccacaagagtggtattg
ttctggaggcccagcttctgttaagatgactaaaagagtggcctgacacacagcattact
tcccagatcccaattatgtatctttaaaatatcacctattaagacccaaatactttgtta
gttggttgcagccctttgagcaggttaccatggatttacactggcataatgggccctcgt
gatgtatgttccctgtcaccattgaaacaacagtcagtgcgtctgagcggggcccacctg
ccaagcaatatgttctcaatccctcaggcagagcggtgtgctgctccgctaagaaaacgt
ccccccactgagcaaatggcagagccatggaacaggggcgtctgtgagcgcctgcgtaaa
agccttggctggtcctcctggcaggagcagcaggaaggggcagtggggggtattgctgac
aagcttcactgcacagggacaagcaacaagcatgcagaatcaggacctgcctgccttcct
ctgcttttctccctttccctcttccttccatttcactcttacctctccttccctttttct
catcctctcttttcttctaccttcctctctccttcctttccacctctctctcctctcttt
tcctctcttattctcccttccttccttctgtccttccttctcttccctcctcccatattt
tttgctccaccccttcttcccctcccccctctctctttctcttcctccctctcttcctct
ctctctgccctttccttctctctgctcttcccaactccttccttttgttcttcctaatgg
aagaccacaggctattgtgcacacccatcattatctcaaatggcttcagggtgggtgcct
ggggccaattgttaacagaccagtataatacactagtgcttcttctcagctgcccgggga
ttttgttagcatccaaagatgcttgctgatgcagatcctgcttcccacagaacagtaggc
tgcaaacagccagtcactcaagatctgtggaggtcacatttcatcacactgcctcctcca
agaactcccactaccctaaagctcggtgtcatccctagatcgagaggcaggcaccatcct
tacctaggaaaagcagacttttttattctgcacaacacatggactaggggcttgggcggg
gaatgctgtggctaattagtgatagcaggaggtctgtgctgtgaagaatgcctccaaggt
gctgaacaattctgctgctagtttctcctaagatagaaaacaacagttaaatgaataagc
cctctgtgggttatgtaacaagcaaggggtgcaaggctgttctaagtagtcaaacaaatg
cactacagcttctttttaaagtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gcgcgcgcgcgtgcatacgctatagtacactggagcatcagaggacaacttcaggtgtta
gtccatcatcttcttcctttgagacagggtctcttgcttcccacctccatgtgtaccaag
ttagcttgtcccacaagcttatgggaatttcttgtctcaggctccctttgtttgtttgtt
tgtttttgtttgtttgttttgtttttagagacagggtttctctgtgtagccctggctgtc
ctggaactcactctgtagaccaggctaggctcgaactcagaaatctgcctgcctctgcct
cccaagtgctgggattacaggcatgggccaccactgcccagctttttaattggtctggag
ttgacatgcatttctactgtatctggctttacatgggttctggggattcaagctcaggac
ctcacacttaaatgcaaggagctttcaaagctacagttttacctgagcgtttgaacctcc
tgttaaaatgtcctaacacccagagagttctaaaggccatgatgtgtcacaaatagtcct
tgtcaagtgtctgaGAATGGGAGCTTTTCCATGA
Primer
(+)caccGGGAAAATGGAGACATTGCT
(+)TCATGGAAAAGCTCCCATTC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.