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Human element [ hs989 ]


Position: chr5:90,768,370-90,769,843 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ARRDC3-AS1 - NR2F1-AS1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTGAGTGACTTAGTTGGCCTTATCtttagtcataatttcagattggaagtgaaagcgaat
ttaaaagatgtggttgtgtagaaccatctcttttattctttttatacatgcatgtgagtg
aggtaagtggttagacatattcttagtctttttgcccagctcaaggaagagttaataaaa
ttacgttatgtaaagtgcattgaactcctcaagagagaagtgttacattaatacctgcct
cacagtgatgttctcagacttaatgtttgtaaattgccttggtactcccagtaacatcct
gatgaagcatcattttgttttattgcaaggagctctaagttacacagaatacaagttaag
ggggaaataatatcccagtctttattttacaatcagaagtacataaaatagagagaaaac
attttgttccagttgtgaatggtaaaattgatcatttatttttttctctctgttactttg
gggatgacgtagagtttataatgtagtttaattgagcactcaaggttaaagtatttaatg
gcagaattggtgatcatgatacaaagagatctttaaggacactggtattcaaatttttaa
agttaaattccaattttaagagtcagttttttatatgattactattaagtttggcatttt
tgagacatgtcttaaatcgatatctgtaatacttacaaacatcagtagagagaatcatat
tgtaaacacatattcttgctgtagggtacattttaaatgtctaaacactaatcaatatag
caaaattaagtattgactaaaatagctttataataagtaattattggtttgctcttttag
aaattagacattttcactttgggaataaagagtaaatttactgtcatgaaattaaagtgt
ttttgacctttttgtacaactttcctctgtctatgaaatgattaggtttaaatatgattg
cacagctgtattatgttgcaagcatcaatttttaattattataaggtcaatgttagaaca
aatgtgattagaacagtacctctgtgcagttatttactttctactcagaaaccactctgt
gtttactaaaactaacccaaacctctctcggttgatatggctaattagattcttgccaaa
tattttattttcctcagtgttcattctatgtatgttattttgttgattcgttcagttttt
taaaatacgaatttcgtgatttatttcttcccttcatagggggacatttatttttctatg
tgtctgtgtgtacatatctctctgtgtgtataaccacagataacaatagcttcacaatcc
tcctgccttgtatagcacaaatatttcttccccacaatattattgagaactgatttgtat
aaagcacatctaaagagaaaaggagtttccttgccaagcctagatttttatgattctata
gtcacagagattTGCTGCTCTTCCTGATTTTCTC
Primer
(+)TTGAGTGACTTAGTTGGCCTTATC
(+)GAGAAAATCAGGAAGAGCAGCA


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