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Mouse element [ mm985 ]


Position: chr8:8,488,054-8,491,339 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Slc10a2 - Efnb2

Timepoints:
e11.5

Expression Pattern
midbrain (mesencephalon) (9 out of 9 embryos) 

Embryo 1


Embryo 2


Embryo 3


Embryo 4


Fasta sequence
GGCTTGACGCTTCTCTCCTAaaagaaaatcctccccagagtctctgattaaagaagggcg
taatcactctttctgattcactctgatttcacctcaaaggggacccgaggtttctttata
ccaagttgactcttacttcaaaccaaaggcagaagagagggaaaaaaaagtcaagtcagt
ttgagcagcctctcccaaaaagctcagaacgtcaggttatttataggtgttaaactgaac
ctttaaacacagaaattgccagcctctatctgacgcagcgtgtaagacaaggacacaggt
cttgtgcaactctgaggtgggttaaataactcagacacaaaatttatgtgcctcgtgcca
tcacggcttctgacccaatgctgtatagtctgtagtgaacgtgagtggcgcgcacatgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaatgaatgtgtgatatgttgtatg
taaagagtccaaggcaagaatcagtatcctgtcctgcccatagatgcacaagcacccagc
atccagagggtaaggtagtgtgttccttgatgagcgctctgggaacaagcccagcctgga
aagggttgagagcatagggctgccaggccagctcacactcccgagccagtgagcctgtcc
aactaatcggccgggtttgtttgcacagctttgctggagcgtttgcagggatgcaccccc
agctccccgcagagcctgagagagagtggccagccaagataccagcgggaccaggattca
cctgcatgcccagatacgggcagaaaaaacatagcacagtttgtccaaacagccctgggc
gctgcaggatggctgtccccgaggtcttcccccagctttgctgccaggggacaccagcca
ggtttatctaagggctgagatacactctttgaaattcgcagtcaggcaggcctgctgtga
cccagggagggacttctagagctcccccggggagccaagctctacctggaaacgcttggc
agacacattcaatgaggttcccacagcccacagccttagtcagcacctggtcggtggagt
gactcagaaattgggagcgaggaggggcttcaggttttctgaacccactgtcacgtacgt
cacgtgattaaccaaagcatgagcctgctcagaaccacaggcaggagccatctgcctttg
tcttgcctttgttatcttacagaaccagcacggggaggaacagcctttgactttccagat
tcccccaccaccatcaccaacccccacctccagcagcaggctgggtgataacgtttttga
ttaagctcttgcacacatcagcaaagcctaattatgaaagatctaataatatatcgccgt
gtttctctgacaaccacgggcgtctcctctcagcatcctccgagctattggaaaggggag
cagacactgacacctcgcactaactgcacagggagagggccaggcctagaaccttctgca
caggacgattggggtctttctgcaacacccatctcctgcaagggcaaacttggctataca
caaaaagggatttgtttgattttgttttttaagtcgggggtgtggggtggggaattaagc
gttgtttggcaattaaaataagtggaatgaagaatcatctcattagcattcctccagtgg
caaaggatgttcaaaccttgcgaccctggcggtaagatgcctcacactgccgctgcttta
tgtatagctaaaaatacattcggtgacactttaaccggcaagagaaagcactccgtttct
ctatacatatggaaataagctctctccggagacacctggaacaatggcggcaaaatctat
atcaaaagagacgcagcctctgcacagctttcctttgtgcccagaatgcttgtggcagcc
ctgagttcatggatttctaccgtggtgcaatttaaaacaaatgatgcttgcttacctcca
acccccacctccctgcaggcagcttgcctgcgtgtgcaggcagtataccagggggtcctt
cacagaggaatttgccacatacacttgacacttgatcaaagcaggggcatttgtctccct
gaaacaaaactgcaaacaccaaaggccctggccccatgatgctcctgggtcttcctgcac
agcctttgtgaccacggttcaattttgtcctctgacaatccttcaaattacactttccag
gaaaagaaaataaaaaatcatgagtttttttttttttctgcagaattatgagggcatcca
ggagactagtctcatctactaagttccaggacagtggcaaagaggagactctagcctccc
tagacctctggcttgtaagagaatccctacccgcttgtctcctgtctccaataccaccgg
cctggtgacttctgggtcctgaaaacaacagatttggctacagctggaggacgttttccc
actctggtgtccagctgtggacgtcattctgtgaccacgtagccaggctctctttcattt
tatgaaggtcgtgtgtcttttcatttcctcccctgattcccagtcctgaggctggctgcg
tgggctggtggcaaaggccttgcctagcaagaacaaggcctggcttccatcctcaatatg
gagaaagggaagagggaggagagagtcctagtgcagctcttacatttgatgttactttct
ctgtcctgtctccatcatgccgctcttctttcctcccctactttttctccagttggacaa
acagctgaagttccctgtacgttatcattatcaggccagagctgcacttggtaagcttgg
gcttctccatttccccctgatagattaacagtgtctagcccagaaaccatctttaaattc
ctgacaagttcccaaggcgaatgtggagtcttgttttcccctaggtaagctcacagtcca
ttaacctacccagggcaatgggcactggccacccagagtctccctgacagcaaggtagaa
atcatttctgtgatcaaggtctgatatctcacctctaaacctgtgtggtgagggtggctg
gtctgcaggaagtgcctccgaaaaggagttaaccatatcattcaatttcctgttgctttg
tttctctccgcctgataagcctttatcagaccaaaatgaaacttcgctctgatctggagc
tgggcagctcggtagacacatacatacctttgatagctcccctcttgggaagcaggggag
tctaattgataaagtacgaaaacCTGAAACTGGAGCCCAGAAGtct
Primer
(+)GGCTTGACGCTTCTCTCCTA
(+)cacCTTCTGGGCTCCAGTTTCAG


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