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Mouse element [ mm984 ]


Position: chr8:91,794,564-91,797,381 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Sall1 - Tox3

Timepoints:
e11.5

Possibly also reproducible staining in caudal basal forebrain.

Expression Pattern
hindbrain (rhombencephalon) (5 out of 5 embryos) 
midbrain (mesencephalon) (5 out of 5 embryos) 

Embryo 1

Embryo 2

Embryo 4

Fasta sequence
attCTCAGCATGAAAATCCCAAActcatgtcaaataaaaacaaagctatttctgattcca
agcgtcaagagtttggccaacactgagatccaggctccgggacttcaaagccccacgtgt
ccacagtggttttgttggagaggattgcattggatgggtggacacacgggccaggaccac
ttcagggacttgattcttccttgtgggcctcctaggaacactttgcaattagatgtcctt
tcctatcaggtagcaggaggcagagggatggggaagtgttaatttaaggggcgtggtggg
agcttctggaacctaggagccaagaaagccaagttcatgggaagtgaagtcagctccaag
tgtctaaacccacatacggttttatcttggtcatacatgcaaaaatgttttcattgtgtc
tttggcgatttgcttatgccaatatcactcagctaataaagatatatcattatacatgac
atttaaacataaaatattccctttcttccttgtggctctaagtttacaccagaagacaag
aagaggggactttctctgtgttcagttagctcagctgtgtgtcaggctgtcctgacagtc
cggtagaaaacagacaaggttaccaaggccatgcccaaccgaccctcagcccttaaacca
gagtaagaaaagcaggccagggacggttttggaggtccagccagctagtggtctgggtgg
ctgacccctgagccatgcttggctttgccaccgtccccaaggttgtgttggagattcgcc
ctggcattcactgggccatttgtgccctcccagcacagctagtggctcttacagtcagca
ggggactaggccctggcagccatggctttaaaagtagctttgttcaaatgagtctctccc
agaggcagtctttgagcctggtgcccacaaatttccagacccgggagaaacgctggcggg
attaagctcctcgggggttgggagctgggggtggggtgtgtttatattttcttcgcatcc
ctttgggatgggggaacggacagggaggaggaagggccgaggagggagaatcttcattta
tatgctaatagttgcccgcacccaggctaaactgagagaactatttcatgggaaactgac
aatttttgtcagccaggctgcgccttcacatctcaatgggccaataatcttgattagcaa
aacaattgggggccttgggttctcgctcaggttacactgggccagtttgagcatagctgg
ggcctgggagatggaactcattgtcccgagccaggagtttaggcaaatgaaggggaccac
tgtgctgggggagggaggtaatggacaaaaggggttaatttgattgaccgaatcttcatc
gttttataacaatcatttacttagcaagtaattcgaaagaaaccagtggcgccgacagga
aattagaggctgtatctgtgtaccccagatgtgtgggaatttgagctgcctcctcctgcc
acttagctaacccgtgggggagaacggggaaaaaaatcgcaaccccttggggccctaatt
accacatgcagaataagtccttatctaaaaatacacacacacacacacacacacacacac
acacacacacacacacacacacacacacacacacacacacacacacgttcaacacctaca
aagagtcactgcgggccacggccagcaccttctttcgctgagaattggcttttggttttc
attattagttcacagattgctaattgatgctggacgaggtgctggcgtcgcccttcgagg
aactcctaagcctcagagagcagccgaggcgcgattttcggtgcgacccactggccttct
ttcgtgcttgtgtgtacgcggtcggaagggctgtttctgtccctgcactcggggaggatt
tcgtccccaccagcaggaagggaccgccctcaggctgcgtctgcgactaaactgcagttc
aacactgaaggattaatttattggaaactatcttttgaaatactgatgaactgactacaa
gtgaccataatagtacagagaggtcccgtggacccgtcgcggagccgcacgttctcagag
accggagatttggttgcactttccagctgatccgcgacctcactgcgagtcaaccttttt
aaatgctactgggtacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtaccatgaaatttcagagctgggaaggtggcggtgacaat
gatggtgtccgtgtgagtgtgtgggggctcatcccacccactcccctcctgtcctgccca
ccctcactgcaatctcctgactcagaaccataatgccctcagcagctatcacaacctacc
tccctaacaggaaactcatcatttctttaaatattttggtcccttctcctctgaaagagg
agacacatctttagtggttcagattaagtcaggctaacacagtggtcctgccttcaaatt
acgccacactcccccacccctcgagttttcaaactccctagtgacagaatggatccaaat
tctgtttctggaaatgagattgttactactttaggttaaaatgatctgcacagattcgtg
ttttgaacacatggtacccagctggccttgctctttcacaaagttctggaaactttggct
atttggtcacactttggatatttaggaggactggttgggtgaataggtcactagggttgt
ttaggccacttcctgactactctctcagctccccgGTCCACGGAGATGAACAGTAGTC
Primer
(+)cacCTCAGCATGAAAATCCCAAA
(+)GACTACTGTTCATCTCCGTGGAC


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