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Human element [ hs983 ]


Position: chr9:128,525,348-128,527,214 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: PBX3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCTGTGTATATGCAGTCTCTCAGCaaatacagtgctgaaattgagccaatggcataaaat
attttatcttcaattagcccagtttgagaaaagcaatagcttttgcagtctaatttttct
ttgaaatgccctttgtgggggaaaaaaattgtcacaggattacaaggcatatatgttttt
atttcataacctgaatttaatgattttgtaataatagcattaatctttctagattaccat
ctttttgtgtgaggttgtgttgggcattaagtttgaacctgcagaaatgaacaaaaagat
attgttaccgattacatgtaaacagcctgaatcattcaaagggatgtggagaagagtatt
tctatagtgtgaagccagagaaaatggcaacctgccaaagctaggtgcaagctcttgtta
catggaagggttgggcctgttctcatttcttcttgaaatggcttaattggtgtcagcacc
ccagggataaaggcctctaacactgaaatccacacgattcaccctgtctctgctcagtgt
agggaaactggtaacaactggtggtgaatgaggagcgaacggtgctgtaacaatactcga
tgatgtttgggatgacagaaattaatacgcacttgcttgaagaaagcaatgattaatggc
agtgagcacgggaacgctgtccctccttttactccactttgatggggattgaaaagcaaa
aggctgttttcattctctgtggaaagcagaggtcacacagagtacattatagcaattttt
cctctctggtttttttatttcataaatattatgataagcatagattagatagattttttt
gtggaagcttaaaaggatattttatgtcatttaaacgttgtttatgcataaagaaatcac
acattcttttcttcacttgttagatcatttcccttcatgtcagaataattagtgtaatta
gaaattttaaaagcctgcaaacatgaaattgtattaatgctgcttactattttacaactg
gaatcaaaagagcttagttttctaaagactgcaaggacagggcggggataagagtgttgc
aggggctttcacctttttcctgcccctccccctggtttttctcagtgaatgtttgatgta
aatatattttgcaaggtacttgcacttgtcagcagctttcttagccatttgataaagatt
ctttatcctacaagaaagcctgaaataacagaactgtactttggataatgaattcttcat
ctgtggagaactttaaaacaaagtacagtgttggcatttttttcttttgagtgagaaggc
tgatatatcttttggatccgacaggaagacataaattaatagagttctggagttcagttt
ctcattaataatccattttgtcatggttcttggcattgtcagcctagtagctggttcata
ttttgctaacggataaaagcagattatgtcttaaggcacaaagcaagaataaagagttta
tcgccttttgggggaactacatgctataagaaaaatattgttttgcaaaaagtttcaatt
tttagttagcaatacactacattttctaaggtaaagctgttattttaagatccgaaatgg
ttcttggaaccttaggatattagagttttagatcattgcttagagttgcctttgctgatt
gcaaaggtttgcttttcagggacagttatagtagatttaagcttgtttttatattttatt
tttagaactctatgtattgggatataattatagttcaaagagaaatgcagaaaaatcact
attcctcttctttgcactggtttgtctagatattctgttacctctGCCTAGTTTTGTAGA
CATGGGG
Primer
(+)CCTGTGTATATGCAGTCTCTCAGC
(+)CCCCATGTCTACAAAACTAGGC


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