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Mouse element [ mm976 ]


Position: chr9:120,527,563-120,530,649 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Rpl14 - 1700020M21Rik

Timepoints:
e11.5

Expression Pattern
forebrain (9 out of 13 embryos) 
midbrain (mesencephalon) (12 out of 13 embryos) 

Embryo 1

Embryo 2

Embryo 3

Fasta sequence
GGTTCCAATTCTGTCCCACAgaaggaacaactattgatgtctaatagccagtcagacttt
aaaaaactatgtacatgcatataaacaaacagatttttactacataaatggaattttgga
ttctgtgtacatatacataaaacacatatgcatgtgcatatatatatgtacacacatctg
tatctctcatctaggcgttagtaagatatttatcatctctgtccatccataaatatatgt
atcatctacatatctgtcatttacccatttatcacctattttctatcatctatcaataat
ctgtctatgtagctactatttatcatctgtttatctagcatcttgtctatctttcatatc
tatcatctatccattttctattacctatctcctatcacccacttacatatttatcaccta
tcattcatctgtatatctctccatgcatgcacacatgcatgtatgtatgtatgtattatc
tatcatttatccattgatttatcatctatcaatcatcagtcttcctagcatttagttatc
tgtctgtctgtctattatttatctattatccatccatccattcccttattggcatcacct
tgtgatctccccaggtttttgagaagttcctaacttcttccgggtcttgagccttggctc
cctgtgagacgcttctgacctatcacccacacggtccagcaagggagattgacaacaggg
ctctgtggtttagcttacatttggccctcgaaccctttgggaattcctgctacttacaag
ctccctccgtggttgtctcccacgagggtatgagcatcattcagccggctctccctgcct
ctgtggttttaacttcttgttctgtcttggttgaatttggttctgttttggtaacttaga
ttcagtagcacacatcattcttccgtttgtaacatcaatcgaaaaaacgacaaggtggct
gccatgggaatagccggaacaaagactgggcaccccagcacccaagtgcttcctctctgg
ccttccttcccagcggcctacactaagcacttttgtctgtttgttgttgaatccacatta
ctagagagaccattgcgtcttctgtcaggagacttcactccccatcatcctgacagtcac
cagcctcacccccacagcttctcagctttcccacttttggcctgcaccctatccggactc
ctgctcccagctccccgctgcagccagacagctcaggaagggttaaactcgggccagcgg
cagctccacacacttaatccggattcccagcgctgatctcctggcctgtcatttgcattt
ctctgctttgtgctgggtttttcttcatgcctttcctggggccccagtgcccgcattagc
ataccgcgcaggacgcgctggctgcagggccccccgctgtgcgccagcctgtgcaatcgg
caggcgccatcaatttttcagcactttcctcatttctcattacagtcaggcccacgcggc
tccccactcaacacaatcctcagccgtccgtcctgctggcaagccagaggctgccatgtc
ccctcctgactctgccgagcgtgcacttgcttgttgaagcgcccaccataattaatcaca
gaattaatcccggccaagcctgtcttcctgagtaactagggcagtacgcttgggtgcctg
gtccccacagcaattttatcaaccttgcgaacaaccctgcagccaggaatgctatggggg
ccctgggctgtgcctacctgcaacacctgcaccctttcacaccttcgccatacctgcact
gatacaggcctatctgcaagccagagcttatcatgcacgccacaggcatcggagagacac
agaacgttggggctcacaggaaagggtgtttcttttcacatggcctgatggagaagttat
ctttaggtaccaaagtgggtggttgtcatagcgatttgtgcattattaagagtattgtgc
atccccgaagctaatctgataatgaagacggctcattatcaggaggaggcaaagttgaca
tctgcttggctttttgctgtgcacttggggtccagctccaaatccgtggttgagtcccag
ggtccatctttgatgtagtaaccccggcttctctgctctttagggggcagagagagaggc
ctgggttggagggagctcctgacacttgcttagtggaggctgccacagctggaaaacact
tcagagcacaggtgtgacagaggaggggagagagagagagagagagagagagagagagag
agagagagagagagaaccattcaaaagaagtcaggtcatctctctggagggcaggaaact
cctcccaccaggactagccataggggactgggcatgtgtgagaaaggccagcagtttcct
aaaggtaggcacagtgaacctgacccacacaagcttttgacctctcacccttccctcagc
tcactggcacacttccagtctcttaacagactgcctcttccaattctttgttgttgggtg
tcagaccctggagctctcagcaggtgccctctgcactcccaggcaccgtgcaggtaagta
acatcaagagccattgaaaagcaaaacccagcccagatttttatgattttgatctctcag
tgacccaggcaggtcttgaactcagaaccaccaagcttcagctgtcttgaaccatctggt
ctgcctagaaatgcagattttagagtgctgtaacccgttggctgttccttgacaaaatat
gaggcacgtgggtctcttcacaagtttttctgtttgttcgatgttgttttgtgttttcct
ttaacaaaagcaacacagggcacagtgaagctggtcaagaagggaggtggtgctcactta
gtagctcccgcatccccaggtctgcatctttccagagatgtttcttgcctctacattcct
gtgtaaataaatcccttgaaagtcctcaaatgtcagcctccactttccccctctgtcccc
cacactctcatagcagcatattgaaatcttcctcatcttataaaacaatggccaaacagt
ccaCTGAGCATGCGGTGTAGTGTGaTc
Primer
(+)GGTTCCAATTCTGTCCCACA
(+)caccACACTACACCGCATGCTCAG


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