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Mouse element [ mm974 ]


Position: chr13:47,950,533-47,952,080 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Rnf144b - G630093K05Rik

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
aAggGGGTGTGGTAGGCAGAGAAAgtatgcatacttttgttactgaaggactgaagcacc
cttgcacgcttgatgtctgcattacagagaggctttcccagttggtgtctgcaatatagg
cagggctttcccagagctgtattttcgccactccttggaggatttctcacaacccagggt
ggtgtgagtgagacctaagaagggccatttgaggttttgggaaccctgccttgtcacctc
caagccattctagctaaccaccagttcctgcgttgcctgagaataagggggaaagacctc
ccccttcccagtccccaccccacccccgccccgactggtttcctggtagcttgtgcttct
ttctggtaataccttgttagagcttgtgatcaacgtagttgggggtgaaagaattctgac
ttcagatcggaaacgtcgggctttaaatgaaatcagcgccctgctgggagccgtttactc
tctttctcccctctcagccgggggaacgattcggagatgtctaggcctggttagcagcag
gagtgaccttcagtctctcctacttaaaatcaattcaagatgatcacactggcttaaata
aaagtctccatccagtctcccatgcctctccccattccagtgtcgggactctgtccggct
ccctctttttatgacagtcctttgcacgcaggcaggcatcctttctcagttcgttctttc
tcagatatgctccgaggagatcctgtgtgcgcctctaggcgcctggcctctccacctgcc
tctgctaacaacccagagttcccacatcctagctctcccctctcccctcaacctaacagc
tagccagatggccactccccagtctcccagcatgactttgactgacaggagcctttgaaa
aacctcggaaggacgaagtcatctcccggtcaccctggctgcctggcctttaacacccaa
cacagaccaccattatctgtggaataggaaacaaaggaaattagccctgcttctccatca
tccccaaagatctcacttaagccacaaggcaaggagatgcccttcattttcctccaagag
gtacaaatgtcagctgttaaaaaaatgcaagcaggaggtttctctgtgtcaatggctggc
ggtctttgttgtggagagagtgcattttattcctctgcagaccaggaaagacctaacagg
ctcctaaaataacttccttacctccacgtccctgggagccactgatgagagttgctaagc
cttcagggcaggaggaggctggcttcctttccaatctttaacagcagctagtcaaagtat
cagcagagaaaattgactagagactttcctgacaatttaaccctaaagctgagaaagaag
gcaagaaaatcatgtgccccatttatctccccaaatatttttcttccagaaactaagtct
ttaaatgaactttgtttcctttggctacctgtgacggaacactagaagaaactgttgcac
gaactagacatgttcacatatgtgtgcaTTCATCCATGGCTTCTGTGA
Primer
(+)caccGGGTGTGGTAGGCAGAGAAA
(+)TCACAGAAGCCATGGATGAA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.