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Human element [ hs973 ]


Position: chr3:71,507,469-71,508,874 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: FOXP1 - MIR1284

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGGCAAAAATCCTTCCAATGTAtacatgtccacatacacacattacatagacacatgtca
agctataaagaaatcacccaggatcagaactttacatactgtcaatttctcaaggtgcaa
ccccattttcaaaaaccccaaacaagcatcagatcaaacgaaatatacatttttttaatt
ttgggaaagtgtaatatccctgtgcttgacaaggtgaaatattctgcctttttactctga
tttgcaaaataggtatgtgagcaaaataacagaatatagcatttacctatccatttagca
aataatatggaagacctactctacatctttattcaaatgaaaatactttccccagcattt
atttctttagctggtagaaaccccaccctgtaaggaacacaagcgtaaagcaatctcttg
caatggaccattttacttattctgcaatttcttacccaaattacacaggtataattattt
tgacactataatgaaaagaaaatgggatttgggcaccgtaggtttatctaataacactat
ttcttgccagacttcacagcactgacagtcacaaagaaccttgtccattccaataggaaa
tatttgattttactgtaggaacattatttattttcaccaagttgctattatcagaaagga
tatgatagctgaataataaaaatgaaatcaagaaattctggtgtttcaaggctttatttt
ttttctgctctcacttttgacattttcttcccctggagagacaagataaagtgctgtcat
aaatgggtgacttttcttgtcaaatgacagatttgattctccatggtaaccacaaatcaa
ggtgctagtaggaattaaagcttctcttaaaaggcgtctttatgtttataaaatgaattt
aaattaaatgggtattaggtacagtctttacctcaatttatttattgactgaagagctct
ggattgcaagaagcacatttgcatttttaaggaaagataacatattgtcctgacagatgt
ataaacaaagcaagttacaaggtcatgcttcatacactagttctgagacccaagaagggg
atacagatggacatctagcagttaagaagtatttaaatactgaaaaaggtgtaaaaatta
cctacaggggaacagatgatggagtctctctagttcccttcctaacgcagctttttttct
attcagttaataaagatttgtgaaattgtcacaaaaagaatgccaaaaggcaatctccct
cttcgtcttgtgtccctcatgtaatagatatggggttgttgttttttaaaatcccttcat
cacaaataaatattccattcaaaatcatattattttagcctccaaattcaaatacagcta
aaatAAAACATTTGCTTCCCAATGTG
Primer
(+)AGGCAAAAATCCTTCCAATGTA
(+)CACATTGGGAAGCAAATGTTTT


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