Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs954 ]


Position: chr7:114,287,987-114,290,557 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: FOXP2(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCCTTTAAGAAAGGCAGGATGGctagtgtctataaagatattaatgtattaaagattaat
tagtagatgggtgtaaatgagttaaatttattacagactaaatttttaaggcttgatact
atatgaagagcaatagaaaacagtggaaacagagtagtttatttaatagaaatttgtctt
ctttttcattgcagctgactactctaaaaattatgctcttacttaatgtgtattgtctat
ttctttgtctttgactaggcagcatggctacaaaattatgacctcaagaaggcattcttt
gaacttgtcagaatgttgtttcttttggtgacagtgcccccccatctctgaaaactaagg
catctcacataatcaactaaatgaatagtgacagctaacattttgtatttaaactcctgt
cagtgtttaaacataaaaagcttgatgcaaaataaatcaaacaccagtgatatgcaagtg
aaacattttgttaaaacagtctttgacatacttggatttaaatctgatccctttttagct
tataaaatgctacaactttaaatgaatatgaaaaatccagaggttaaaattgaatcacta
atctggattgtatataattgaagttaccacttacattcataatcatctataaaaccttca
ttaaagagaattatgcattaaataaattggaaggatcctttcctactttttgtcttcctg
aagtgcttgcttaattgtttttagaaagaatttgactgcttattatgtatctagttgata
ctacctacctaacacacagattcaatgcagttttgaaagaacgtcagtcgaccacatcat
ttattccattttgaaaacaaaaatcaatatacctataaagtgacccataaattagaattg
gctcacacaatgtttgttcagtgctgcctttctgaaggcaccctttgcattttttcttca
cctctctgtttgaactgcagtctcggtaagaggctcattaggggacattagggactggag
ctaaccagaattccagagcttgctttgctcttattaatgcatagtagagtagaatgcatt
taaatatttcataggcattcagtaatttgtgtgtaatcgccttgttagcagaccagtaga
agtagaacaggcctgtgaaatggtgttagtgattgcatgggtaatttacagacctttgcc
atcagaaaaagtattattgttggctagtatgaagctgtgaaatagaactaccaataagta
aaaaaagaaacttaataaaggttttgtaacaagcatcttcagggataacaaccccacttg
gtccttttgaagcagccgtaatttatgacataggcaatatatcaaatgcataagatagta
ttatggagcattcatatgaaaagggtatttgcaacattagttccaacttcctgcaaggga
catgattaaatgattaatgaaatgtccctttgcatatgcattttgaaacagcaattaggc
actgactgagaaaatccaccaatcctctcatttttcagtattatctcattcttgatttat
aaatcatagagaatttttgaacagtaatatgtagtacctgagatagttataaaaacataa
aagagaataatttcggcacaaaatagtcataaattcataaattcataatttaatgttaat
acttagcctatttatttagtcttattacattgtatttatatctgacactatttctgtact
ttgattggcataattaagtagagggaatgaataggcactattcttttacatatcactggt
aaacaatagcgaggaaaggagaagggagatgtggcagaggtatgtatgtgtttttcaagt
tctcagtaatccactggaggctgttctataaatgatcattgaagggctgcaagctagcct
ataattacaggaaagaaagtggcagctctggcatttcataactatgtgtcctcgaaaagt
gctttgtgagtttgtcaccaatgataatttagatagaggctcattactgaacatcacaac
actttaaaaacctttcgccttcatacaggagaataaaggactattttaatggcaaggttc
ttttgtgttccactgaaaaattcaatcaagacaaaacctcattgactattattgtagtct
acagtctctattctaataaaagctgcatagataaattgaatagggctctaagacccaagt
atataaagcaaacattttgtactttttttagttctttaaatataagatcatgattatcac
taagcagtaaacaagtgtagaaaatcattttaaaaagtgatttcacaagaaaatgttata
gtgactatgccttttattgcagacctgtatgttctacttatcttgcttcctgcatttaca
ccctaatctcagtgtataactgaagcatttttgaaaatatgcaacattttttcttatatg
gaataaatatgtttgtgttccccaagagttcatggtgaaaaaaaaaaaaatcttacggaa
acacagcaatatgaagccttaagaaTACAACACACAACTGTATTATGCTGG
Primer
(+)TCCTTTAAGAAAGGCAGGATGG
(+)CCAGCATAATACAGTTGTGTGTTGTA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.