Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs942 ]


Position: chr6:50,126,514-50,127,963 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: DEFB112 - TFAP2D

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GAACACATACCAGCCAGTCTTGttattatatcaaaacttcccattttttgataaatccaa
aaatcaatcctatttcaaagttaattttaaaatcataaattcgggactagtattttctca
cttcactctgactttaccagggcattattatcctctgtcgattgtgaaatatgaaatgag
aaatctgcttttattaatctagttagaggaatgaacttcagacttctaaaatgcagcaaa
gaaattgagtcaggcaggaaaaatataatgagaaagttaggatgccttagtgagcaggca
gagtcattttatgtagaggtttccctcaagcaactaaatcgagcccaaacaagcctattt
ctctgaaacttgctttacccgccattccgtcgcaaaatacattgtaataatatcataaaa
cagcttgagacgaagaaagattctgattgactgttcaacattccaaaagggtaaattaat
atctgtgaatctcacagctgaagcattttaatgcaaacttgcactttgtgggaattgaat
ctgtccgccaaaatcatttatttatatatagaaaatggggggaaatagacatttcataat
agcaatgagtccaggggatgctgttatcatgagctaatcacatcccatgggcatgatcgc
actcagctgtgtcccctgtctcgtattgctccagaggaatgattatctcatgataataac
ccttatcgtggcttagtgggtaataaaaaatatatacttctttcccaagttcttggacat
ttattcatcagctaactttttccctcttgagttctggtcatatgttactttctgcttaga
aaacaaaaagaaatcttgtattcagataacattttctgttagcaaagtggaaagaaaaac
aataataatgtgactgtattgatttgactgtttaagagtggcattgcagacaagccctga
tcacttgagacctgtgcacagaagatccatgcttgcattgacatttggtaggatgtctag
actggctaatccacttggaacaacacatgcatttggtagcatagaaacaatgaagggaaa
cagatgcttatacaataccatacatatctttgtactatgatgcacaactatccaacatgt
acattttactggagattatagactatgcagcttaaaatgtggttgtcccatttagacaaa
acagcctatcaatgactctcacactgtcaaactgccaggcacaggtatgccaacagaaat
tcaaggtaatgccagtcacaacagcaggaatccgagtcctttcagtgagtatttgcagct
taagatgcaaaagcaacaggaattctgaggcaaagtcatgaagaaacagaaaatcaaaaa
ggaattagagcaaaagacaattgagaagaagggaagtggaacacaattcTCCTTGTTTAT
TTGTTGCCTG
Primer
(+)GAACACATACCAGCCAGTCTTG
(+)CAGGCAACAAATAAACAAGGA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.