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Human element [ hs936 ]


Position: chr3:19,027,747-19,029,355 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: SATB1 - KCNH8

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AAGGCACAAGGAGAAACACGgtagttagcagatgagtcccttgaaccaaatggcagagtt
actgacgaagagaattatatagttcaatttacttattgctttattcattcagaaagaaat
gacactgaattctcctggaattttacatattaggagggaagaaattttggttttaaaaat
caaactgtctggcttctgcagaggttgcaaagcaaattggtcaacttcataatcaggaaa
taacagaaaattgttaaatgatttatttggcaaagctggctatgttatttcttttagaga
agagaccttttcagcctgatacaaaaacagcctttgccctgatagacacagtttttgttt
gcttgctgtcatcctgggtgcacctatgtggcatctgaatcactattaggtctctgttta
aagattcatttttttaccagaaataatttctctagagtaataaacaatgcactgcataac
accactttaaaaattcttagaaataactgcaaggaaattagttacaattattcacatagt
tcctcaaaatggtagcacataagaagaaagaggggtccctctcacccgttttttgaagac
catctttgtttacttcattcccaagtattaagagattgcatgatccatttgcataggata
actaacatataccacatcatttgcacgtctgcaagtacacgtgagtaaccgtaattacac
gtgacaccaattactctattactttgtattaaattataatggaaaattccactagagaat
tgaagcctaattgcatcttaatttgcataattttgcatattaattacatctcagatgaat
aataaatttcagcagatttttaatttatgcatagacacaaaaacaagtggagaaataatt
tagaaaaaaataccagcaactattacttagggcattcaactaattttgcttagtttagca
aaacaaaacttggtttgtttaatatagcatctttagactgattgctgtttattgcacaat
atgtcagtcttgaaatataggtgcaggcatgatttttcttaataaaaaaagtgttcaatt
gtagcattttaagttcagttttttatagtttgataaaactgtattggagataatattgtt
tcattggaaatatctttagttgtgatacactttgattgagacttaatttctgttgcagtt
attttaaatgcaggggattataaaaatagaatataaaaatatctttgtgaaggagatcac
taataaaatatatcaagtgttttctttcttgaatttactatgaagtcactcaagattgtt
ttagtgatttttgcatgaatgattcagagtgagaaattccatgtgtttcattttgtagca
tataacaatttagaggaatggctttcaaagattactactattttctgactgttttctttg
tttctcattgcttgcatggtaaacagtaacatttgttcttaattgctagagacctgggtt
ttaaatttagtcacctttactttggatttattaaataaacagaaggtatatttctcagag
ttaattaatgcattttagttacataGCTGTATCTAGGTTGACAGTCGTT
Primer
(+)AAGGCACAAGGAGAAACACG
(+)AACGACTGTCAACCTAGATACAGC


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