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Mouse element [ mm932 ]


Position: chr14:24,219,932-24,222,183 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Kcnma1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ATAAACCCTTATGCCATGTGtcaggactgacttctggccccatagagaaaagcaacaccc
attggtgaacatggattctaacttggtaattctttgtgagacagcatcaagttggaatta
ttttcagacggatattaatccagtctatttattaactttataaacatgccctccatatcc
tgatgggtactgtgggaattaacctgtataaccaatagattaaagacatggccattccac
tcagcaacagcgggagggtggtggggaggcaactggaggctgactctgctttctgggtct
ttgtcttttaaattcagtgaatgtttacttagctggaactttctccaagtgagcattaga
ctgggcaaattggatttaaaagaaatatcgcaagttgagaggtgttgttttaatggatgc
atatctcttgcaaaaagagtttcagatatccatcttagagaaataaaggagaatcaagag
aaagagaaaaggcaggaagtgaggcaggaggataggcatttagaggccatctgggaggga
gcatttcatttatagggttgcagtgccaccttctggttacttcatatttcaagtccccct
gatctgaggccatctatctcacaatctaagcctcaatgtgcagctgtacaactgcagttc
tccagcgctgttatacgtaagaattttattgcccgtcagcagatttctaacccactggtt
gaagtttaataatcttctgttacctgaagtataggttatataaaaacctagcatgctaat
tgttgacaaaccaattctaatacacaaagctctgtaactcacccagtaaatacccaaata
catcaacagagagagctcctttttgttctaacagtgtgctattaatacaactgatcattt
aacatgagattcacaacgcgcatttcaaaatatggaggaatcaggggcaaggcttcccct
tattaacttctcctttatttacaattgagaaagaaaagaacattctctcctccccctccc
cactccccccatttttggagaacaagttccttgaccacaatgccatttgggaaatatgtt
gatatagcaaagtctgaattataaataccttataggcgtttatataaataccttccatct
ataagatgttatatggttttgcatggtgatgaggaagttgtggggaagatatgtcaccga
tactgtgggcagagaaacactacctgtcattttctctgggggggggggggagatcaccga
gacgacgtgatagcaaaggaacacaataaagaggagaagccgggatgtgatagtgtgtct
gattatatctgcaaaggaaactgtgaaataaattaacaccaagtacccatgagatgcgga
tggtagctccacagccagcagttgctgtgcatcaggggaggtttctgttcagtagtaaga
gaactaaagtgcaggtaggctgtgaatctggtggtgataactaatggccacgccacttaa
gactcggattagatctctaacagggggaaaaataagaataataaaagactctaaaggaca
gaagaatgcaatagggtttgtattttcactcagaaaatataaaccccaaatgggatcaaa
ggggcccaagaaatgaaaaatgacaattcctctgtcgaccctgatcttatctcaagccac
actatcacatgataatgctctggggtttaggggagggcagaactgttctttgggtgccaa
ggaagcagaagaacattatgacccactcggccgagagaaacacactctaatttcaaaaag
ttattgagatttaatctctaagaactgcaaaaatagctcaggcaacaaccaaaagggtgg
ctctcaacacctatatgagtctttgtgggtagggaagtatattggaaaggcaagatttca
gtacttccaggaagatgtcatgctgaggtcctcccaatccagacttcagcttcctaacac
aaacacgctgattttatctaccgattattcctccttgatttagcattgaaacaccttaat
tgcgttcctttgctatcacgtctcggtgatcttccctaccccacccccagaaaaaatgac
aggtagtgtttctctgcccacagcatcagtgacatatcttccccacaacttcctcatcac
catgtaaaacaatataacatcttatagatggaaggtatttataattcagactttgccata
tcaacattAAAAGCAATGGTGTCTGTCTaaaa
Primer
(+)ATAAACCCTTATGCCATGTG
(+)caccAGACAGACACCATTGCTTTT


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