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Mouse element [ mm93 ]


Position: chr3:101,865,977-101,867,575 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Nhlh2 - Casq2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CACGGAGTCAGCTCTGAAAAtaagtgagttcttggaagccaacaggaaaggacaacagct
tatctctgtgacgacagtctaagtacaggcatgaaaggaaggcagagataccaggtctgt
aggtctgaatggagccagcgctctccccccccccccccccccaaaaataaccagcatctt
caggtgtctgtttcaagacgtctggtttgcccgaagttccaaacctaaagtttctctcat
ggaagccccctcagaagtgttcgcagagagttctagctagatttgttaaactcctgaaca
gaggaggagacagcctgaggaaatccaaggatccccttaaggaaagggtagacctgaggt
ctggagacaggatcgggtcagtgcaccccgccccctgttggagagaggaagaactgcaag
cggctttgggctggaatctggaggcctaagtgaattaattgaatggcagctagcccagcc
ctggagaggtgctggaaggagtggagttcgccctggacctctcctctgcctcccgcgcag
cagtccacatctgtcctgggacaggcacacagactgtgtaatcaggctcagctggtaatc
agggaagtgccgaacagacgctagacgaaattatctccctgtcccagacaaagtggcctt
gcagatgagggttaaaaccagacatggtagaaaaaacaaaggaaggagagtggcagctgc
taaggaacacctggccggtggccggctcccaactgtctgcattcacccacagagcctccg
aagccagggtgggttaccaagggaagggggacttcagaccagtggcgtttggtgccagaa
tcattgttacaggaggaatagcctagacccacagttgcaagagaggagagcagaatcagt
ttccggcaaatggccagctgtgtaaatgagcatggaaacgtgctcccatttcactgaggg
gactgtgctcccactttcaacgtgcagatggtattagctttcccccaccctcttcccagg
ataagagtccatttctattcctgtacttgtgacattggggtcttcagaagggactttgca
agtgttacttgaagcttccgagttcacaggctgtggcagagggggtttagggggaaataa
tcttaggaactatagagattgtgtggaagacggagagctctaatacttcgagggagacat
gcctggcccattccgtaagggctctgtgtcaggcacagtgctgggcacatggtgttgagc
caaagtgagctgagcaagtttttgtcctcacaaagcttcctgtcattgggtactgggcgt
ggcgggagcaaatgctcacacaatgtaaaactgcacctgttcagtattaggaagaaggga
tgggagtgtctctggagtagacttgatcctgctagggaaggccacagagaaggtggcaag
tgtgctgaaggggaagacaggtgaattagccagtcctggagagagaggaccaggagtgtc
ccagccgctgggcgggcggggtgggggtgcagggcaggggcaggcacagcagctgcaggt
gggtggggcttgttctcAGGTGTGTGTTAATGTGCGGTt
Primer
(+)CACGGAGTCAGCTCTGAAAA
(+)CACCGCACATTAACACACACCT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.