Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm929 ]


Position: chr3:127,616,644-127,618,219 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 5730508B09Rik - 9830132P13

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
gcCCCGGGACACTCACTAAGTCTGtgatagacagaataaattaatactcttatagtcaag
atgattgccttaatagaagtttgttaagagaaaataactttgttgaaggataaaaaatag
ttacaaaatctcttgaagtcagggcgcttggtaggggactctccttacagggcaggaagg
gggctctaaatgcggatcttcccaatctctctgaaacccggggattagaaatcttgccag
tgtttcatctgaggcatccaccacttcagtgggatatggaaatcactggataaaggacta
ttcaaataaaaagtctccgctttgggagactctggagagcaggggacagacatttgagta
accaatcaatacacacaggttcagtgggcgcttggacccacagaggaaaggcacaacaag
ttctgcccttgtggggagcgcctcggggaacgcacagacttgattttctttgagttcttc
ttacccgtgatctttccttcctgcttttaatcaacaacttatttcttctctgtgatccct
cagggtttttcccctctaagtggcaaggggaaaacgatttcttaaaatgactaacagaag
aacacatggtctgcctactgtccgcggactcccttggatagtctaaatatagactacaat
ctaaatacagacctcagagttcccactgtgtttaaaggcagcacactgaccagccaaggg
gagctttttgcgttattctgtgctgtttctttaaagagaaatggcgtgagttttttgaaa
taataactagtaggagaaaagacactgcaattgctcaatttttaagtaattgcctaacta
gggagcagagtcccgggagagggctgacggaaatagcttacgctttttttagctgccagt
attttaactatatacagagaaaaatgaaatctatgtgaagtacaagtatatacacagcac
tggaatttccaagggagttaaataggtaaagagttcattctaacaatgtcagacactcaa
atgtaaggataatttatacagacatcattggagtcatgttctttaacttagtgaaaaggg
ggtacacgctttctcataaggaagagaaaggcacatggcacagcttcacctgcatttcat
agagattattcgatgattaaggtataatcactagaattattcttcctttatttaatcctg
attggtctttgggaattttgtttgaatgctaatttgggggtggacaaataatcagaacat
ggcgattgacgttggtcttacttcccagctgccctgtctcagatgctggaagctctagga
gaggcagtttaagcatcctctgcccttctggcatcccaccctccagcttctccactattt
cactggttttatgatctgtcaaggttcatgacaaccaataactggaattagaaattttaa
taagaacatgtcagacttgaggccagagattattacattccattttcctgaaaaaaaaaa
ttttttttatgtaacaccttggaaaggaagcaggaaatggcagtaagcatcaaaatTGTG
GATCAAATTTCCTACC
Primer
(+)caccCGGGACACTCACTAAGTCTG
(+)GGTAGGAAATTTGATCCACA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.