Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm928 ]


Position: chr5:38,456,294-38,457,933 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Stx18(intragenic)

Timepoints:

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
agCaCAGACAAAATTCCTGGTCATttgcaattcttaaaaagccatatgcaagggtttagt
caagaatatgctttgctttataagttacccggctggaagataaccatatcaatgttgcta
acgacttgtgtccagaagaatgtttgctttttctgtttttcacttgagccctttaggaag
tatttttcatggacttcaagtgatacaaactcattcatcaaacagtaacatttatatgtg
aaaatcttcatcataaggcagtttctgctagaagagaggcagggtctttgaatttccccc
caaaactgcaacttcagaaaatatgtaagagatgtagcaattaacctacatgcaggtttc
taatactagaaaatgggcagctagttacattcaaagacaggatctgatgggcccaaattg
cttaaaacagcacagttactgaagatcttccctagggagcttgagaaaccatttaacaga
tgaaagtacattctgaaaagtctgaccttacaggcaatcataaaatgaatcaaaacagtg
ctttttccccctgaaatgtacagagcccatctgtgtctaatccagtaattatagactgtg
ttcaattaccttttcaaacttggagcagactggagactaggcagtgaacaaacatagggt
tttgtctagacctcaattgaccacagtctaaaacgtgaatttatatctaattttattttt
tgtttggtttgatagttcttagaggattcatttttgctacttggtatttcagcctcttga
tctcagacaccgccttctctcatcacaaaagcttttgtatctgctgtggcttaagctgta
acaagaggtttagttttgtgagtagtcactgttgcttgcaaatcaataatttgtgctaga
gaaaaggctacactgggctgggggagggggtttcgccagtgagtagcattttttaaaata
gccctttaaatgtgttgctgctgactgtaactctttgttgtatggttaggaaaaataaat
tattttccttaaatgtaaaaaactcttataattttcagttgctatgttcatttaccattt
taaaaaatacttggagatggccaaaagaaatctgtctttccctattctctcagtggtaca
ggttcagtgcacattcatttttattgtgtctgctgactttgttataagatgtattttcaa
cccttaaataagtcagtttatgctttgatgaatcagattgttatattttgtccaaaaacc
ttgtcagttcaagttttttttgttttttgttttccaaatgcaaaacagaagattaccata
actttgcagtgggatagcctttttgttgttgatggagtttagtaccacttatctcatgac
agccgggttgcaaacacatgttttggtgaagtatcattgcctaccagccaagaatttttc
agaaactttaggaccatttttagtatgtgatttttttaggtagctgtgttctttagattg
ctctcccctttggaaggcttaagactgacacaagggatggactaattatacttggtcata
tagatgcttttctgggagtcacctgaagaaatgatacaacaggtcatgtataccttctct
GCAGAGTAGGGTGAGCTCTA
Primer
(+)caccCAGACAAAATTCCTGGTCAT
(+)TAGAGCTCACCCTACTCTGC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.