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Mouse element [ mm920 ]


Position: chr5:111,684,904-111,686,863 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Mir701 - Pitpnb

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
atagGGATTTGTTTCTCTCAATGCaaagtcccctgtcccaccctgaatggaaactacttt
tcttatttggtttctcaacaagccactacccaattgtgctgctttaagcatggaaacaaa
caaacaaaacaacaataacaaaaacctgcagagccctggtagaataatttggatccagag
ggactcgtgcagataggaccaccaagagaagccaggccaccctgttcccagtaggcacga
cacgcatggcctctgccccttggctctcaccagtgtctgctttccaagccccacagagca
gaagctggcttgcagcatggctgtcaggccgatgcatctgtgagtgctgtaggcagcctc
ttgagcagctcctttgcctctcctgctgcaaagccagaaacaaatatttagctggctgca
gagagccattcacatgagtgctgtccccctgggggtcttctgcacacagcgcctggctgc
tccttccacgtgacacaggacatataatatatttatgtctggtgtaaccatagaaacctg
ttgtatccgtgaagacattgcaattctgcttctcaccagaaagacggataaagccccagg
gcagccgccactgctgcaggctgcattcagtagtggccacatctgcggactttaacaaag
tatcagatagacacaaggaggtaaaaactgctctgggtgttcttttagatgctggagcca
aaccatcattttctctcatcacccacacagcttgcacttcattacttatcccgaagacag
tggtcatgtttgtgtgacttcctctagggagtcagaggcataaggcaaatatacatttgt
catacaattgtacaattgttggctttcagagaacacagtgtggccattgaaaggggtgga
aatgatgctggtctaacccaggctccttcattccctggatgcagcagtaaggtctgcctt
cctggtcactgtgaggaaggcagtcatttaagagaaaggcccagtccacagcagccgtgg
cactggctggtggcactgccccagtcttcatttcctttttttggtcccctgcaggggtcg
taatgcctgaaaaagctagcttttgttagcgcatctacgttgcctcaatacttaccaaag
cctgcttcacaaatatttattaattataaaacccccaagggagacatggaatatcaatcc
cacctcttttccaattaattctgcacctttccatttggcaaatatgtatgttttgtggct
cttaatagagcaaggaaccctttggctcttttgtctgtgcagtggcttgttgttggctct
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgattta
aaggaatttatccatggaagctcccagtgcagctgagagatgacttgggcgacatctgct
ggctggctggagaagtaggctgctccacagaaccaaaagccatgcccttaccccaggccc
taagtaaatcctaaatctacagggcccggtggactgtgggtggtaggtacaatcatagct
aagaaggcagggcatttacacttactgttattattttctttattattgttatttaaatgg
cagtattagaaagcaggggatgtttcccaccagctaataaccatttaagttgcatttggg
ggctttcatgacttgacgacagcttctcaaaatcgccgggctgttaaaccccctactggg
ttaatgtggcagaaaaagacaagaagggcgcttctgtgcggaggcctctctggtgtctgg
ggggtggggaggggagcaggtcttttcagaaaatccaattagagggagagaggggaagaa
ccccccagtgccccaggcagacactcagccttcaggcaggaaagcagtatagacaggaac
ctgcctctacccaaagctcaTTGGAGACAGAGGGTCTCTA
Primer
(+)caccGGATTTGTTTCTCTCAATGC
(+)TAGAGACCCTCTGTCTCCAA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.