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Mouse element [ mm912 ]


Position: chr1:5,011,681-5,014,381 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Rgs20 - Atp6v1h

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
aAgtAGCCAACTTCACCTCAGCATagtgggggagtttgttcggttttgtaagccttcagg
cgtcttttctgaactccatatgtacctcttattttcagagttctgcttcctgaaatgtat
tcctaggagacttatgtatgaaagaggataaaagtaaacatgctcttttttttttcttgg
aaagttaaaaagatgacattcttgggcatgtttagtgtagtagtcaggagcacagggtcc
tagaaacagccttcccactaacaacccccaactgtggggatgccgctttaatttcccagt
ttatctacttttgtcaaaacgagtctttaaaaataatctttggctgggagtgatggtgca
tgcctttaatcccagcacctggacaggcagagctctgtgagttcaaggccatcctggttt
acataggaaggtctaggacaactggggctatgtagaaagcactttgtccacaccaccacc
accaccaccaccactaccaccaccaccaccaccactcaaaactttaaagtttaacaattc
ttgccttagtgagagaatcaagatgcaaggtaaggctgggaatgtagctcatttgagaaa
atgttttcatagcatgctggaagccctaggttcagtacagcaatgctgcccataatctca
cactgacgaggtggtacccatatgacaggaatcacatatggaggtaaggccatctttgac
ttcatgaatttgaggtcagcataagctgcataggaatctaagaacatgtctcaaataaga
agaggaggagatggaggaggtggtggtggaggaggagaaggagaaggaggaggaggagga
ggaggaggtagggttgctaaaagaaatgtctccaaatatttttcattgttttaaaatttt
gtttattgtttgttttgttgttgttgctgttgagacaacgtctcgctgagtagctcaggt
gagtattaaggtttccactctggcctcagtttactgttcacaggtatgtaccaccctgct
ctttagtgctctttgaaggccatccctcccatctttaagcctgccttagcttcttgggca
cttatttagtgtagttacaaactggaacataactctgccaatacaaacacctccctcaaa
caaaacacaaaaacatttcaatctgtctgtgaataaaagagtagtgcttgccaagaaaaa
tgaagtgggaggcgggaagcaacgaataaaagtgacagtgtgttgcggctccggtgggga
gagcgccagagaaagctgggctctggtcccaaaggggcgatgcgcaggcactctccaggg
tcctgacggcgggagcggcctcgggcgctcctgggcctggctaggttcccggacttggta
gtcactgggcctgcctgttttctttcggcagtggaaatcttgtgggaagggattgtcgcg
aagtgggggtgggggcaggaaacctagcaacccattctcattcatgaggccttttctggg
aagcagccgagctgtggctgattttgtcactgtcgtttgtatgcgcgggaaagagttgat
ctgggctttccttcaataccgtttcttggggaatagggtcaattagaatttttcttctcc
agattcacaggccctcgcccctgcctttgccactgcacagtagtttagcagatggagctg
tgagctctgggggtttctggaggtgtgccaacagcttacttgtggagggcaaaggagcca
tttggaaaactcagaccggcgacctcacccagagatagataggtcgctttgccctgggag
gggatagtggtagccctccagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgttgggggaggagtgctcaacgcatgccaacacacttggctgtaccgaagagc
cgaacctgggcggatcatatgggttcagtcacccggaccatgggtctgggccacacctgc
tcctagcttttgagccccaggtgcagagtagccacgtgggcggcggcggtcccagaaccc
gccaccaacctgttgcaggacgccagcaactgagtgaagctaagaagttaaaacaggtct
ggctcctttccagcgacctacacccggactgtgcccagcctcagccattgctacttgccc
acacacggggaagttagaatgcagtgaaaacgctgacggaacggcacctcgcacacttcc
gagacttaaaagtttggaccacatccaagatgcctaaagaagcttagggcattttgtaga
ttcccgcctttggtatcatcagctcctgttgtgtgaaaactcgactttcctttttgctcc
cccccaccccccccaattcccagactgtcttcccggtctcttttaagcccagtctttggg
tatgcttcattaggcattttgctccggtcctctgcttcaacacagagactcttttgaggg
agctgtgaagtgttcaggaataataataataataataataataataataataataataat
aagtcctaacagatcccagaaacaaagtttatactcatttgctcatgtggagacacgcac
catttaggttccctagacagttctggtcctagtcctggaagcctgggtgggacccccagg
tgtaagtctggtggatgtgggatggtaatgatctatacaccCCAATAGCAAGGACAGGGA
A
Primer
(+)caccAGCCAACTTCACCTCAGCAT
(+)TTCCCTGTCCTTGCTATTGG


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