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Mouse element [ mm911 ]


Position: chr5:122,375,617-122,377,688 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Cux2(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
aAaaTGAAGGTGCCGAAGAGAAGTacggtgacctcgggtgtaccccacggtaaatcaccg
agggttcccagaaccctcaccgactgaaaaggaacagactgggggggagtggggtgtagg
ggagctggcctgactgtgtgcgcactcaggaatcagaccagggtttggccacacaagacc
aatgatggagagggagaggggtgtgtgtgtgcgcgcgcgtgtgtgcgagtgcatcatagt
ggggcctgctgctgggacctatgtgcttgatcgcccctcttgaagcttcctccgctgtca
tggaggctttcgcaggagtacaattcagcaggagttgtcgtgactcatttgcataatcca
aggaacgctctgtttgtgtggcctgcactgctggcacggacttgaacagggctccccacc
cccaaggacaataactccacgaaccctcctgcatctatcacccgattatatttgcagcaa
tcaagacccataatttcctaaatccggtggtgcaataaattcctgcaatcagatttatta
aaaaaaaaaaaatacacccgcgcgcgcagatgcggggagcgcatttccagggtgagctct
ttaatccaacatatgtatgacgaagtgcggcgcgtaatgaaagaccccatttgtcaccgc
tgatacacattcgtcttgcacacacaatgaaaccctttcaccattagataatgaaatgaa
aggaccgttaacccactgcaaagccttctccctgtaaaagacggctagtatctgaacttc
ctgctccaaggctatttaccagtgtcataggcctgatccccccaaacctgtgaggatggc
tctggcccctggaacccttttgggggggcaatctaagaaggaatgtctgtttctagaaaa
acagctaacttttggtgaaagtcccaagactgaaggtgagtgggatgggggtgggggagg
tgagcagaggggacagaggcaccaaaagacactgcttaaaacctgggtggctctctccaa
ggtgctgaagcatcagcattgggcagggtcacctccgcgctgtcagcctgaggactagga
aggattttgagatgggtgagggatgggatagagagggaaaggaagagaaaagacatttgc
cacaatttatgcattcatgggtatacacacacacacacacacacacacacacacacacct
cccaagaacttgtaaggccaggacaataaggctctcacatcgtaggggagaaagaactgg
aacactgaggtccactgaagttttacttagtttttaaaggtgtgtttttctcatcccagg
acaaaaaaaaatgggacatgggatgcaccacggattaactgtgtatctgacactgtgagt
tttatgagcacttatttttaaatgttggagcctaggctcgcctgaaactcccaaggttcc
tgccctagcctcctgggatcacggagcatggagacacctgcaggtgtaagctcccctctc
ggggaccctgtacctcttcacacagccatacttgctcggaaccagtgtctgcagtctgga
ttttacttatttcttccaccggaggcggaggcgggagcaaagggattgcagcacaagcca
gatgactagagttcagacccttagcactcacctgaaagctaggtgggtgtggtggcctac
tgataaccccactacattggaggagagatgggggattccctagagcaagctggctaggca
gactattcaagtgtgtaagcctggggggatcaacgggagactatgtatcagtaaatgaag
tggagagtaactgaaaacatatgtaaggtcacatacatatgaacctgtatacatagaaga
atgcccgccccctcccacccatacaggaaatagccatgcagagcatatctagctgtcagt
gtggtataaccccagggctgtccctctatctgtacatcgctgattgctgatgggtacaga
tctgactgacggggcctgctgaccgcaccaagtccaagggccaaggtggtgaggcagggg
acatgactagctCTCAGTTCTGGACCACTGCA
Primer
(+)caccTGAAGGTGCCGAAGAGAAGT
(+)TGCAGTGGTCCAGAACTGAG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.