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Human element [ hs897 ]


Position: chr10:103,245,010-103,246,610 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: BTRC(intragenic)

Timepoints:
e11.5
e14.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
tAatTGCTTGTGCAGTCTTCTTGCTAccggcactcattgttaaacatacaagaaaaagaa
acaagaaactgaaagctgtcaacaaaatgtgtttaaaactttgccctgagtgggcatcag
actggctgtttttaagcctgaagtccagccgcattgattaggcacgttggccatcagcat
cttccagcagagcagatctgcagagaaaggcaggacccaggttttagtgctgattctgga
tggcccttgaatatagacagaatatagacagcttataacaaagccattccaaggcagttt
tattttacaaatctaaaactttcggtagttcttttgaactaccgtgtttctgtaaatttc
ttcagtgaactctatgaaccgttttttttgtttttgtttttgtttttaaatagcagcggt
tcagctgttgggaaccactgatatatctgactgaggcacttcaagatgctagaatttatt
catatttctatctagccagggagctaataggctcgagcttgtctttgtggattgatctag
attagcatgaaatgagcccagtcagtgtcttcctcagtgaaaagggagaggttaggggaa
agagggatgaaagaagaaagttcttcatcaagaattgactgcagtattgcctgctgatgc
atgtcggatcacccgcacagagagatcacatggcttctccaaaagtcaaacgatcaattc
gcctcgttttggctctgtacttaatgcacaaacagtgcgatctgcggggctgtaattgca
ttgttagggccaaggaacaaggctgtgccttttcagcagacagctggcagggagagaggc
atgttgttaggaaagagagaggcaaggcaaataaaattactgctaacgctcagagatcgg
caggagtcctacttgcctaatcttaccggtgggagcaagcggctgttgtaatccaattat
agcagcataagcaatttgttagacactccgcataatgtaacaatttcccaataaactctg
acttgtaataacgtcggcaagagtccgcataaatctgcccgaatggtgggggctggagca
ttcggctgggggcttgtaattggcgccatcagcacgttttgcggagtgcagtatggtgca
gtcttttagtgcaggaattttaaggagaaaagcgtggcacatttctcagggaaaaaaaaa
aaagtggccattaaaaggggaacagcaagaagggcatactcttgccgtcacattacctag
gaatcttagtgtagaaagaaaacaggaggaagccatgtttcctcctaatactaaagaggg
gaggtggggaaaagagtgtgtgaattagttaaatttctttatttaaaaggcatcggtttc
tattatttataccttcatctccagccccctaaaatgctgttcaggcagggtttagctaac
atttttataaaatggtcatactcaagacaagcctagaaatgccaagttaaaatctgtttt
cttctggagttagcattttctttacaacatgaaatatatattctttatgaccaggacaaa
tcttttgaagatattaTCTCACTGAATATCAGACCTTTCTG
Primer
(+)caccTGCTTGTGCAGTCTTCTTGCTA
(+)CAGAAAGGTCTGATATTCAGTGAGA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.