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Mouse element [ mm890 ]


Position: chr3:99,036,850-99,040,479 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Wars2 - Tbx15

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
aAaaCAACCACAGAAATAGCCCAAGaaatgaatcaggtggtggtgccagggcatgccttt
tatctcagcactcaggaggcaaaggcaggaggatctctgagttccaggccagtcagccaa
ggctacacagagaaaccctgtctttcgtgtgtgtgtgtgtgtgtgtgtgtgtgtctttaa
acgtatatacattagaaggattaaaaaaaattgaattgaattaaatacccaggtctttgg
gaattcccttgcattgctcttccccaaaattccacaagcagatattaatgagtatcacct
gtgaggagcaggacactgtatctgtcacggggaaaccacagtaaacgtgatggagattaa
gactattcagaaaccttcacagcccacactctctcaggtcaaaaacaaaccctcatatgt
ttctgtgtggagcatccttaacaaaagcatctttaaaaatgttaactttccccttcatga
ggtgttttttcaatcctgttataaaagtactgaaggtaccctggtgggggaggaggtaca
aagtccttgcgcttgtagtataataaaatgattgagcccaccactctctagccactctcc
tctgccctgggagcccgagggctctcccagctccaggcttcctgtgcctccgaagccctc
agctggtctttagcagacatgatgacgtaaaggaaaatgaatccggtcccttcatctttc
tcctctttctacagcatgaagctaggggcccgtggaggatctaatatcaaaaggaagcgg
gcaatgccactacttggagagaaaaaaataattaccaaatttcctgaatagtaaacagct
ttaaggggggggggcagaagaaaaagctcaggcctttgataacttggccccgggtctgct
tgtgaataccttaagggttatatcatcagacagactccagcagcccgtgctattgtttcg
aaaagaggaaaccaggaagaaggtgaaagagagagtatatgggtggaggaacactgcctc
ttggggaggagtttgatgttgaaagtgcagtttaaaaggctcacggtagtaaggctgaaa
gacaaattggacgaattatccgagtcttcaaacagcggggttcttggagccgttgctcct
tccttgtggaattaataaaaatgtgtggattcggtgattgtccagctaagatgtcattag
ctacaaagataagcccgaagtagccggcctatgtcattccgaaaacaatcacttgggggc
agtcttgtgactgttaaatttcctgtgttgctacggtagattttgctactttttcttccc
tttgcaatcagtttctttacctgggaatgatgggggaagaggggagggcaacttaggaag
taaactttacacgctgctgctacatcagccaggtgatgtcacgagaacgctcacacctct
gaacagtcactacggttttcctttgagtcttggaaacggaaaatttccaaggctgaggag
gccggcgctgtggggacaacagagcacaaacaccagggttgtacctgcatcacggtgcac
acgtgccatgatctccctgccccgggacacagagtcaagtctgtgacccttgtgaactaa
tagaacctggttagcgaagagggaagtagagtgtggaccctaaggagctgcttactaact
cctcaaagtctagatgctggccgctagaggtggtttcccaagctgaatctgggcatctta
gcctctcaggcattcctgacctgtcgcaggctgaacagcatgcccagggcctggttcacc
ttgttgcagaaccaggctgcggccatcggcagtagtgcgaggagctgtggcgaagctgag
tctagctcttagaccacacacctcaaaacagtccaagtgatgacagtatccgtacctttt
gtcctgattttgtttcacattcaaggtggttagtgatcttggatcttagtgaaccaggag
attaaaatccctgggaaagaagcaagatgtggcctctccaatacccatgacttaggaacg
ctggcccagaaccccaagaccagagagactttgcttgtttgtggacttggagcatcgcag
actagttgagagccctaagagcaaacagctaaaccctcgctttccaaaacggtgctggag
actatcccagcgctggtgtccgaggaagaagcgtcccacggcttctctcacggacctacc
aggcaaaataagatacaccctcaaaaaatccagaaaatgggaaaggtcggggtgagaact
cagctctccctttggtctggtctcagacttcagcacttatgcatcacggaggccacctcc
agcctgccacacaaatgagatccacgcagtcgacaactgagatcacagctccgaggtccg
aggaaatcgcaggagctcacccttcgctcagaccccttgtgctgtaagggttaggccctt
ctagaaagaaaggggcaattgtcttgcaaattctgagggaaatgtagtaaaaagaaatag
ttaatgttcaatgtgacatttttcccctccagaaaactgagacgtatgcaagatctcagc
ccctcttcatctgtaaacagctaaacaagacaatggctcgggctggggctcagggcaggc
tttcttggagacatagagatcaagtccacaccgccgaacctcctcaaaggtccctgccct
ccttgaagggtgaagaatcgcccggtgcctcggacctgaaggagcctgagaactcagcca
cacgagaactcagccacacgcaaagctttatccgatcaggcttcagcagggccggactag
aaactcagcccgcaacttttttttttttttttttttaattccccttcactccccaagcag
ttgctgctcccctggaacaaagaggattcctttctgtctgtgtctcaatctagaggactc
tccagagtcgctctgctttagacttcgttgcgtgcgaaccaaattgccatgcactcctgc
gagacaagcggtgggacagcagagctgcctgctgtgcacaaggcattctgatgcggtggc
accagggcactcctggttcctaccttaaagggataggagtccagactccacttcccacct
aggtctagcgttctgggacaatccacctaccagtctttcactggccagtatgttggccct
gcccaggaactcaggccaagaaagaaaactcgaagttagagctcttcttaagtggtagat
tcctgattaagtaactttaatgaccggacaccacaaagggtgtgagcctgtcccacctct
gctggttcaaaatggtccaaaattaagtgggaaagtaagagttgggcttagaaaaggcga
gcctgcttgagtcaccaaaaaggtaaaagagattgcttttggcttgagggtgcagaatgg
tattttcctagacatcatactttggttgaatgaaccatgagggggttgtgtgtgagttag
aaggtccgctgaatctgtggtagcaaagtcaccagttagcatggcacagtccccgctgtt
ttcctgctttcaccttaggagaactgtagctagcactactgtgtttgaaccaaacaggca
tcagggcaagACCTACATCACTTTTGCCCG
Primer
(+)caccCAACCACAGAAATAGCCCAAG
(+)CGGGCAAAAGTGATGTAGGT


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