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Human element [ hs880 ]


Position: chr18:36,024,488-36,025,531 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MIR4318 - LINC00669

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CtCCTATCCCTTAGGCCTGCAACATggccagatctatgctttccctagggcccaaaagat
aggcaattgttcatgagcagagcaatccctccaagggcagcagctcttctacatttgggc
attaattcataatcaaacattgatgaatcatgctattttactgaaaagcacagtccttaa
gtcaaccacctaatctaagggaagaaattaaactctaaaccaacataaacacattacaag
tcattagtgtaattaaaaaggaatgtataattaaaacatttgtgtattttagctcaaatt
catctgcggtcggaaattttaatgaactgttcatcaaaggagtctcgggagtctggggat
aagtttagcataacaagaaactgaatgttttcttcccctctgcttcaggaaccccattcc
ctctggtttctaaaaagcaacctgtcattggttccaccaaactaataatgattctaagtg
gttatgattgcttccatgttttaaactgatgttatctttttatcccttaagaatcatgtt
tttcataattacttctcttttgtcctttccttaagacaaatgattttgtaattagcgatg
aaggaaggagtcgtcactccaagacatctgtcaagttgtcaggaagtatgtctccctgta
gctatatttaaactttctgtttcatagcctcttgctttatttcacaagaacatctctgcg
gaatcatgcccaggatcccctaatgatcagtttctataaaacacagagcaattagacggt
aagaaatatcgctccccagaacgtccttcctattcataatgtgcacctcttcctcctagc
attcccttcactcaggcttcccacccacatggatgtgcctgctccagaggctttggattt
tagtctctagcccatgagatggctgagtgtgtcaacaattaggctgacattttccctaac
ttcagcattcagttgtaacaatgctctcttcctgcaaatgaatggcaagctacagtggta
AACAGAATATTTCTCCCTTGGAGG
Primer
(+)caccTATCCCTTAGGCCTGCAACAT
(+)CCTCCAAGGGAGAAATATTCTGTT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.