Mouse element [ mm88 ]Position: chr1:59,009,748-59,013,257 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: Trak2(intragenic) Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence tcatTTCTGGGGAACAGGAAACACagtccagagtcccaactctcagaactgaactctggg acacaccgacagcacctcctttagctgcacagttctgtgttctccctgtggcactgtctt tgtatggtggctctttatttaatctttttagaaacaactgcgtttttcctacaagctacc aagtcaagcatgacacatttaacaagaaacagacctctgtaaaccacgcacatttaggag aaaatcaagtaaaacaaccaactaaattgtttaaagaaggacgggactcaaaatgaacca ccaaaacatgtcactatcattgctgggagaacacattatgactaagaactgagttagctc agccacagaattcaatggtcgacagagagagcctaaatataggcactgtgcttaaaaaaa caggtagatacttccttaaaacaggatactttggacaaaacagccccatgaaaaagacta gaaactcaggaaaatccaccttatgagaaggcagagcctggaattatagcaaatgcagat ttaataaagcatattaaaatatatctcaaattgtatttacaaacaatactttggggatta attagaaactcatgttggctgctaagttgtatgtaagagtgggagcaatgccaatcactg acctgcaacagctcctcaggcagaggtaaaccaagctggaccacagtaagcttttaaaaa tgaaataaatttatcttacttctatataaaataactaacttttgaccaagactaactggt tataccatagctggccatactttgggcaaatctaccaaaacttcacaggaattataggac cacaccagaattgtcatgactttagtgctataaaggcatggggagtgtcaacccccaaat cgaaggggaccagtgagcagaagacatcttgaaggtggagaacacatagtgcacccagca gtgaggtagcagcgaatgggctacgcccagcacagctgttctagcagctatctgtccgtg ttcctgtttcctactttcaatttagcggccagtagtgttttcataatatgacatataagg aagccgcttctgattatagacagagtggaccccaaaggctgttgaatctatgacttaagc atcccaaaccatgaataagattcaggcttcctacaggatatattttgggcttatttgtct gctaacatcaacatctgttgaggtaggtaactcctcccttccacaatctccaccaccaga agggaggtaacctctggcaaggaaggagtccacagcagagcgtcacctggagataagaaa ggcttgagcccagggcaccgtctgcagttctgataagtttccacagatgccctctgtcat cccctatgtacacttagcctttaagctcttacatcctaagcttgacccgaatcaccctct gaggaggcaattgctgtttggagtggtcctctgcccataccacatcagatcattctgttt cttcacccctggctgctgaccattaatggcagaggcctctatcttcaatcgccacagaac tgtccttcattaccatctctattatgtacaacgtgtgtgaactgatattttaattttgta tgctagtcctacatgaatccatgaatctgttattgccactgcttttaaggtaaagggaaa cttgtaatatttgtatactttttgaaacatggtcttgtgtagctcaggctggttttaaac ttgctctatagctgaggatgatcctggatttctgatcctcctgcttccagctctggaacg aagggatgagactcatgccaccctgcctaattcactcagcgctggggttgcccccctgcc tttcttcatacacgcccatcaagcactatacaaagcaacttcactcaaaacccagttaca agttgtaaggagagtctgcgcttcagaagatttgtaagaaagttaatctacaaggccagg acaagactttctgtcctgcccactgcagcatgtaaggggttactgcttgtcatacagtta agaaatttggagaagtttggcctggtaattcctaaacaaagatatgcgcattatctgtag ttttgaagctgtccagctcaactacccaagtagcaatggatactgtttctctgtgttttg ttcaacaaatgaaatgggaagaaaataggagagtgctgataagtatctgtgattcaagac cttcgaatgactccatgattccgtcctaaatacagttgaaaggtctaaaaagcaacaatg aggcaggctttgcaggcaaggcacatgagctgctcactcacagaaaacaagctctctatg gtcactttcatgtccacgaggggaaaccccaaagcaaagggctattatgaacttttcctc caaaaggcagtgtggtccctactcttgaaaattcaaattccaggtgtgttaagcactaaa tattgcatttaatagagattactactaccattggattttattttttatactatgaactct taatactataaaagccaagcatgttaatgcatgcacatattgatattcaaagttgaaagt gagaaacattaagtacagtccctcttttaccagctaagccatctcctggcccaattaggt tttaaaaaaatatagtataaatttaagtactcaggaggtagaaacataaattggaaacaa accattcctggcacctggttgtctggacgaagaagatgcataactcagagcagcgtctct ccatctaccctgctaagagcccttctcaaatgcacaccccttttacagtagactgctatg cagtctctgcagctgccactagccatgatgtaggggctcaaagaagaaccacacggctct gtaactagtgctctaaaagagcttcttatacaaaattttttccaccacacaatccagact ggtgcagccattcaaagactatcaggagtgacttggcaaccttacagcaagagcttctgc ccctaggtttattatctactccaaagaactgtgatgtcacctacatagagacatggctgg aggttgtttcccgtagcactgttgatgacaggaaggcaaagcctactcttcaaagtgcag gtaaaatggggtagagatacactgtagggcaacatgcaccagaatcaaatgctaactgaa taaagcaacaatcaattccacttatatgcgtgaaatattttccacatttaatttgcacac ttagtatgtatagacatattgaaatgtttacctttaatgtgaggaagatggaactttgat ggtataagcttaatataagtttaaaaaagaagtattaaaaacccataaactgtttaaagc ccactgctcttttatcagtgagccatataattactgttacacccttccgttcttaggcta agcttgttcctggacacaccaacatgcacacacagttctgcaatgggaactctgtggcac acttcctggcACATTTCTCAAAACGCCACCPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.