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Mouse element [ mm876 ]


Position: chr11:96,744,632-96,749,165 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Mir152 - Cdk5rap3

Timepoints:
e11.5

Expression Pattern
cranial nerve (4 out of 9 embryos) 
facial mesenchyme (4 out of 9 embryos) 
forebrain (4 out of 9 embryos) 
hindbrain (rhombencephalon) (4 out of 9 embryos) 
midbrain (mesencephalon) (4 out of 9 embryos) 

Embryo 1


Embryo 2


Embryo 3


Embryo 5


Fasta sequence
ggaCAGGACTTCCTGGACCTTTGgaatgcagaacactgaacctgttcatctccctctgag
gccagctgtgtttgtcatttgctttctgagcacaattcttgcctttggaaaagtaagatg
gaggctagagagatgccttggaggttaagagcacttgctgctcttgcagcagacttgagg
ttcagttcccagtacctacagggtggcaaagcactcctaggcacataaggtttaaaaaaa
caaaaacaaaaaaacaaaggaggagccagacatgcctttaatcccagcacttggaaggca
gaggcaggtggatttctgagtttgaggccagcctggtctacaaagtgagttccaggacag
ccagggttatacagagaaaccctgtctcggaaaaacaaaacaaaacaaaacaaaaaacaa
aacccaaaacacagaacaaaacaaaacaaaaaactcaaacaaaaaacaaaaacaaacaac
ccccaccaccaccccccaaaaaaacaagaaacaaaaaacaaaggagaggaaaaagtgaac
cagggcaccagaccctggctcagacagcaggaagcagagcgctaggatgaggggagggag
gacagtgaggtctaggtcccaagatgcacagcacaacttaacaaccaagatggctgaaaa
aaggagcgaagacccaagttgctcctttcccatgaggttctccccaggtctttcctgttt
taaccacgggaagaatgatgaggcagccaaggacggcgggaggaagcagatgcggtttta
tctggctggggtctccctgagctgtagccatgtgactacctggctgacctggggtctcca
tcatgtccctacctgtccacaagacggatcaggctgcccttctagctggccctcccactc
cgttccaggggaaagttgctaggataattatagcctgcttgtttctttccatccccccac
ccccgcccctgttattcctctgagtcctaggattccccccaccccatccacaccacgagg
aactagaatctggaaggctccattaagtagaaattgtaaggttacattctcagaagtcat
ccttcattttttgtccctctctggctaccttcttcccagccttaagtaggcacctactcc
tttgcccttcatttagctgcccagagcctttcccctacatctcaggatcctgtagcatct
acagagttgctctcctcaaagggagaacgtctctgttcagggttggagtagacctgttgt
gttgttttgctttgggtataagatgttgagcctagggtctaggccagtactctatccctg
agctacacccagccttctttttacatttatttatttgtttgtttgtttgtttgtttgttt
gtttatagacaaagtcttattatgtatctgctggttgtcctgggactcattctgtagacc
aggctggctttgaactcacagtgatctacctgtccatgtctctgagtgctaggactaaag
gcaggcactaccacacttggccttacgacagagtttcacttgcttgcccaggcaggaaga
gacctttctaatcctcctgccttagcctccagagcagttgagatgacagacctgtaccac
caggcctggccagccgacctgagtttcaaacctatagttctatgagctataaactctata
atcttaggcaagcggcaaaaatatcttgagcatcagtcatgggacctgggaaattatgtc
cctggcacagatttattttttacttgtgtattttgaggcagggtctcactatgtagctca
gtctcctggcccctcaaactcaagatcttcctgccacagtctctgaggcgcttgctagga
ttataggcacacacctgctacaagattgccattgcttctggtgtgtgtggctgtcgcagg
aagactcataggctactgaccatgcaggctactgggtcaatcagggattcacacagaccc
agcatctgccccatcccttcagggagtcgtgtgtacaaattccattctgtttggcctgtc
agtgactatctgacccttagcccatcctgcctggggtttactcaacagaatttaaaaaag
aaaaaaaaaaataatgtacagaagttgttaaccagtgaccagtaaggtagatgctggaaa
tatgacaacggtgaccccggaggtcatatttgtctgtgtgaatcagatagagtgagagag
acagagtcggggctctcaagccagaaaggggagtcaggcaagggctgaaagggctgactt
ggctgagaaagactgtcaggaggcaaaaggaaagagagaagctagaccgatgctggaaga
gaaggagaaaaatgggaaggacagaacgcagcagagcaggggaaaggatggacagccggc
agatgggacaggaggacaaaacaacaaaggacggttagacgttccagctggtatgaaaca
gacaagagtcggcagaggaggcagaagggagagaagaacctagaggggaggtgctggtgt
caaaaataagatgaggaagctggcatgggacagacagactgagagcaaccggggagagtg
aaagacagacagacggacagatggcagggacaagagggtgccctgggttgcctccattct
gctgtgtttactagctaattgagttaaattgttgtcagagatgtaattaaagggtagaga
gagcgctctggcaggcccgaaacagatggagggggctttaattggtaattaaattcttcc
ctggcagctgaggaaggagcttcgcttcagcctcacaaggccacgggtggcctcccccca
cacactccaggcccctcttgggggccctttggggaaggggctctgctccactcaccagca
gcctggcaggcagggcagcttggtaactgcaggcaggcagggcagcttggtaactgcagg
ggggtagataccaagcaggccttcctccctggctgtggctggctcagctcccaggggcta
agccaagcacacctgccctgtgcccacccttcccaaccttcctgctgccacacatcaaac
tagcctcggccagtgacttcctacaagattgctcctgcttctggtgtgtgtgggtgtcgc
aggaagactcatagggtactgatcatgcaggctactgggtcaatcagggattcacacaga
cccagcatctgccccatcccttccaggagtcatgtgtacaaattccattctgtttggcct
gccagtgactatctgacccttagcccatcctttactttcactacacaggtaggacaggac
cagggtcagcagcctgtaaggacagatcatttggttagatagactaggatgtgggtattt
agactgatcaactctctacccaaatgttaggcttgtttctttgaagaagcatccatggga
agggagagcagatatctcagaaaaaccacatcttaaacgtggttaaagaaagaaagaagc
aaaaagatgggccagtaagacagcgccatgggaaaggctgccgagtctgattccccaaga
ctcctgtagtgaaaggggaaagctaactcctgcaaatggtgctctcacttccacggatat
agcatggcctgtgcaggtgcacatatatacacacgtgcacacacatgcatatatgcacac
atatgcatgcaggaccacacacagaatctagaatgaaagaaaggaaggaaggaaaggagg
gagggagagagaggaaggaggggggagattttcaaaactgaaagaaaagttaggcaggaa
aaacaaaaccgggcaggcactgcatcctcctatagctgctgactcagcagtgagagccaa
gctcacacaaccaacctcaacagctgaggagccaaggcttagcctctctcagtctaacac
aacattgtcttgctctgggcttggtgaggcccagagtcaggaaaagttcccagaggcttc
tggagatcgtggtagagttgtagacacattgtagttgtagaaggttcatgtgacccagtg
ccagctccagggttctctcacttttggcctttgtcctgctctttcgtagtgcatcccaca
catgccggtctctgccaagaactacgctccccaccgtgacagtctgcttccttggactaa
cctcttacctatcccaagggcactgctaagccttcatgtctttgtttctttccaatattt
actatttatttgtttattgtgtatacgaacgtttttgcctgcatgtatgtatgcgcgccg
tgtgcacagagtcaggaagaggaccccagataccttagactggagttagacacttgtgag
ccactgtgtgggtgttgagaatggaagctgggtcttctgtaagaccggcaactggtctaa
ccactgagccatctctccatctcaattctttaggatgctactcttcgcccaatctctcca
aaccctgatacccatcaacccaacattccccattccaacatccttcacctcaacatgatc
tatcaaatcatcccGCCTATCCTCAAGTCCCTCC
Primer
(+)cacCAGGACTTCCTGGACCTTTG
(+)GGAGGGACTTGAGGATAGGC


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