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Mouse element [ mm871 ]


Position: chr8:93,262,503-93,266,310 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Tox3 - Chd9

Timepoints:
e11.5

Expression Pattern
forebrain (7 out of 7 embryos) 
hindbrain (rhombencephalon) (7 out of 7 embryos) 
midbrain (mesencephalon) (7 out of 7 embryos) 
nose (5 out of 7 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 4

Embryo 5

Embryo 7

Fasta sequence
ttCCACCTCATCCCAATTCATCagccacaagagtttcaaccaccttgtgttacagtattt
gctctccaccagccaccaatagtaaagtccttattgctagccagatggccctaatctgcc
tataggccctaatctttgcctgctttacaggaccacttctagtttcaactgtctcagtca
gggttctgaggaaatacatgtttaaactgtttggttctctctttcttcctgaacctgcca
tgaacggataggtttgctcagccatactctcccaccgggatatattaccttaccacagtc
ccaaacgcaatggggctgatcaaccgttgactggaactccaaacgtagagccaaactcaa
gctgtcctctgttttaagttcattagcttaggtattttgttacagcgtcagaatgctaac
acaagtgcggagtcatacacagacctgaaataaagggagggggtaactgtaagtaatgat
cttgggaatcaacgcggagggttgtggaggtcctaagggtggttagggttatccaaggag
atgtgatgcaagaagacagaacccaaagaagcatcaaggtctaaagagacccacagaggg
tgacagagtggcccaagcaaaggagaagaggtagaaatggtatatgcccaagactggtgt
cactgacttctttggctagccagaaaggaaaacaactaataaaaaataaaccattgaaag
atcagcaacacttaagcagcctgtgacgatatgctttgtttcctatggtaataggatggc
acagacttggtagtttaaaacaccagaaattaagcctctcacggttctagaagacgcaga
catgtgaaatcactgttactaggctgaaatcaaagaacagagctctcccagaggctctag
ggagaatccttttcctggtccttctaacattttcctgtcttacatagagccagcatctcc
aaacctgtctttgctccattttcacactgtcttctctctaccatgtatcaaacccctctc
tagcctgtgtctaagggcattgatgagtgcattaaggacccacccaggtaacccagggta
atctcttgtctatgggacaaaacacctaagagaattcattcctaaagagaaatataggct
gaggagaaggctcaacagaggaaatcctatgcctatgtggtaagggccagagattggatc
cccagaacccatatcagagccaagtaggcatgatggttgcctgtaatcccagtattcaga
aaagcagttagggaatcccagaaccagccaaaaccatgagagtgggttcaatgagacctt
gcctagatacttatggtagaaagagataaaaaagtcacccaccagcaacctcgtaccgcc
acacaaacaggcacgcattcacacaaaccacacacacatgcatatacaaaaagagggtgg
gtggaggtttgggtccaggaatggctaggcaacacatcacattgagagcaaacagcaagc
aaaattgcttttatccttaggatagaaacaaagatagaagcaactaggctccattcagtt
cccttcacaagcatacactcagtgtcctacaagcacaaccaattgccagcagttccattg
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagatg
ctggagatggtcaccaaggctttgctcacagtgggtaagttctctaccacagaataacaa
ccccagtccaggactatgcctttaacaacccaccttaggaaaatacactcaaaaaactat
caagaataatgtcctccaaatttctccctctttccctcttcctctctcccctcccctggt
gctctgtccatctctccctctctcccccatgtatctcctttcctcctcctttgtctctcc
tccctccctcctctatccagctcctgcactttggggctttgttcccacctatctacttca
tcctcaaacaacaatttttctacctatttttcaattattacaacaaaagcttacaagtta
agagaaacaatgctgtgttcttcccagagccagctgttccctgacaccaagtaacagtga
ttctcaacactgctagcaattgttatgaaaatgcatctctctgtatcctgttgtcatggc
agctaaagatcaagacatgcctgctaggcacagcaatttatactgatttgaaaggctgtt
ttggaggggggcgggggaggtggagaggggtgatgcattaaaatgcataaccgaatgtat
gtgaaaccttagcccagcaaagtacaatgtcagttattcaaataacatttataaagcaaa
gtacatcattggcttccatcaatgttatgttcattatttatgctcagggaatctgtttat
tgtttttctcagcgtttggaatttccccattatctttgttgtccaggcactgtctgacct
gaacacagacaccaaccaacgcccaccctacattgtgacgctcagagctgctgtgggttc
ccccctcccccgtttctttgtttgctaagctagggacacctcttaggtgagtttctcccc
tggaccaacgctgcttgaaatttcacagcatggccaattctctctgcctccagattgtaa
ttgtacctccaagacacagtcaccacactgacatcatagctttggtccttagtaaggagc
aggagaaaaacccaggaagacggacaaggggtttaggatgccaagcaagaatataaaagg
ttcagatgcaaataattgactacaaaataccacatttattagcaatttggatggcagttg
gcccctaatccttcctgttggttatcccttagaatcacccagagaaaccaaaggcatttg
ggaggcagagaaatggggccgagggaggattagggattgcagtggctaagctcagttgag
aacttagaattctgacattcctaactcattgtttcaactggatgtgctggacaagggcct
aaggaatcttactgagattcctgaagcttaactgagcgtggcccctccaaagataattgg
ttacactaattttcccacggctgtgtaatcacccacacttgggccttgactttatggaga
tggtttcccatctcactttagagtgtctctgagcctgtccgtatttgtttggttgggttt
tttctctttaattttttttccttttattgaaaacggattttttttcccctagcatcctgg
ttaaggtttgccccttcctccacccctcccagctcctccccacttcctctcccatccagc
tttgcctttctctcattaaaaaacaagtgtgggggctggagagctggctcagcggttaag
agcactgactgctcttccagaggtcctaagttcaaatcccagcaaccacatggtggctcc
catccatctgtcaaagaatctgatgccctcttcgggtgtgtctgaagatggtgtacttat
ataaatataataaataaatacgtctataatcactacaagaagaccccagacttgaacagt
atgcagaaacagccagcacaccagagtcagtcatccacaaggagaccacaaaggaagctc
tcgggcccctcttaaagcgagttagggaatttccagttgtagctaggtcaccttcgaaca
ggattgtttgagctatggtatgggatgtttgtacacttctgattggttcatacctcaagg
gaaagagggttaccttatagggactttttccatttctgtcaaggcagttgccctttttct
atgtttttTTTTCCAGGTAGGCCTTCTG
Primer
(+)caCCACCTCATCCCAATTCATC
(+)CAGAAGGCCTACCTGGAAAA


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