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Human element [ hs823 ]


Position: chr13:79,572,260-79,573,591 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LINC00331 - RBM26

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ttaCGTAACCAGATGATAGGTTTATGTTGacaaagtttctttacaaagatgaaagaacta
acttcctaaatacttatcaccatcttttaaatgtgtagctatgtgataatttaagcataa
ttttgttgacatcatttcttttaagattttaggataaaatatatggtttgttgttttctg
tttttttttttctttttcttttattttcatgtggcaagtgacgattaaagaattaaagtt
ttctggtgaatgaaacagccagaccacttttcatgacaaagttggtaattagaaggccaa
tttaatggtgaatcaggcagaaatattcaaaccatgacaaatgactttaataatgcagct
tgcaatgctcgaacagaaataaatttcacttcctcaaactctcggctttttctgcctgcc
tggaagatagaactgtccaggaggtattttgtaccctttattcagtaaagcttttactag
attttaagcgaccaaatagcttgcaaatgcaaaacatcattcaatttcgtatgatttttt
ttcctgaaggtagaccgtgttcagaattctgagtaagtcaagatttatttttcttctgtc
ctgcttagccctgcaatagtgttttattgttgccactctctgacttgaggtattaaaggg
agctgcattggcctcaaaattgaaagctaattttggtgtttgtcataagtttgttaagac
cacatgcattccacagtttgaaaaatttcattattctgtccatgctggggcttcgtaatt
ggatagtaaggatgttcaaagactaatttagtgaattgcacaatattttaaatggaatca
tgcaggtttatgggtccttgggggattcagctaggagcctctcgagaaaatctgtttatc
agtaaatgatattagcagctttcacctagcttttgtcttcattaaattgctgctctccca
attgagggtcacatctgaggcctgctttgataatttgtcattattgtcttgtttattgga
gcataaagttgatacaggctgggctgtgctgtttatacaccatgtgcaaagaagttttta
ttaacaattccaccagtgctaaatcaaagtggaattttttagggttcaagaaagggaatc
atttgtagcattctaatttcctctaaaactctctgagtccatgccatgcccccttctcta
acatgtataacacataatggcattgctagagccaattctccacaggcattttttaaaaat
ccatttttgtctctcaaaataaggttaaattttgaaatccttttcatagtATTGGCCTGT
CATATAAAACCG
Primer
(+)caccGTAACCAGATGATAGGTTTATGTTG
(+)CGGTTTTATATGACAGGCCAAT


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