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Human element [ hs819 ]


Position: chr17:35,474,054-35,475,155 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ACACA(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCATGTGTATCAAACAAGGGAACagggtggcagagtgtttccacagtgtcccacactctt
gaaaatgaaacagatcttattggcttgggcaagattatctgttagaaactgaaggtaaac
attagccatacacaagctacatatacataatgtctctccttagttcattatgatcggctg
acactgtatttcaacatcctagtaatcagagactttaaaatagactttcattccagttaa
agttttcaataaattttttttattgttatttataacctgtcccaggaaaaaataataagt
ataacatgaaaagccaactgagagtgaccctgtagcaccagcagtgaggcagcttaatat
cactgggatttgcatcctatcaagctattcatgctgaggctgggaccctggtgctaattt
ctagtaaatttcacgcttgatgtctccctgttgtgggtcattgccggttcgtctaaataa
actgcttccaaatggctcttccatctaaatattcagccagtttttataatttaattttgc
attatgctgaatagccttccggccagatagagctcattgaaaaaaagcaccaataccatc
ttgacatgcttttatttatttatttatatctttactgctcgaattagacctcctaggccg
actagtagagttttttttttttcccttcactaatgtcaattttcagcatagcaagagctg
tctctaatcttttcctactcattacacacaattttggagtcattttacccacagtgcagt
cggctcctggctgtgtgtttgtgtgcactgagggatggcataattgtttattttccctcc
ctgcataatccccagccagtattgaaaccaaaactgcaaacatctccccaagggatgtga
agaatgacaagaggccctcagtttaggtccctttacatgagataatacaacaccctgacc
tgtatgtaaatatgaaaggcactgttcctccccctcctaccttcacagggatctctatct
tccctaagtcttatttgtcttacgtgaggtgtaaaaggatgcatcagcaccaaaatTAAG
ACAGAACTTGCCCTGGTCtaTa
Primer
(+)CCATGTGTATCAAACAAGGGAAC
(+)caccGACCAGGGCAAGTTCTGTCTTA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.