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Mouse element [ mm813 ]


Position: chr13:46,727,660-46,731,161 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Cap2(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CACGAAGACCATTCCAGACAttcatacaacaacaaccaggttcgggtgtgagaggccaat
gtggagcagcagagactaaaactaaatcaagccaggcataatgacgcacattaatgatcc
ttgcacagggaggactgagataggaacaggtgcatggggctagcctgagctacattagca
agactgtgtctcaaaaagggaaaaaagtcaaagatgttatatttctctccgtgcttccat
cacatgtattctaagtggagatccagggaaactgctatttaacaaggtaatccatctagt
ctttcatttgacccgtcatctgacttaatataatatttgtattaattctttgagaatttc
atatatgcttacaaagtattttgatcatatttatttccccctacccccaactccttttcc
taactccctctagattcaccattttcctttccaccccacccccaacttcctgtgtaccag
tgactttaaataaacaaaacccagatcgggtaagtaagatggctcaacaccaagcctgat
caaccagggttccattcccagggaagaaggaaagagacgactcctgtaagttgtcctctg
acccctgcacaagcctcatgagatgcatgggcacctgcataaatgaacaatcacaacttc
ttttgttaatgtatctgagcctggtagtaaacacctgcaatcccagatcacggaaggtgg
aggcagataggtcaggagttcaaggtcatctttggctagattgtgatttccaagccgatg
tggtacacagggagttgggggtggggtggaaaggaaaatggtgaacctagagggagttag
gaaaaggagttgggggtagggggaaataaatatgatcaaaatactttgtaagcatgtata
aaattctcaaagaattaatacaaatatattaagtcagatgacgggtctctgaaaaaataa
aaatctgaatatagataatggatttctgcaaaggcagctttaaaatcagcagatacaggc
tagaactgtgcccctggcattggctgctgacttcttgctaaatgcaaacagcttttctgg
ggtctctttcttttctctcagaggaatttccgtacagcccaagtgacatcatcctattta
aaggttcatctcagcccacaggacaggacgactattcccacacttatgcccacactgcaa
gcgccaagtgggggtgtgtgggcaaaatacacacacacacacacacacacacagaggagt
atgcagcccaccctgcttgcattctccagttagtatttctgccacaaagcctcgacttgg
gaaattttaacagattcgtaggtatttcatgtgttccaataaatctagagctaaatcctg
cctgagcagtccgtcagtactaaaccaatgaaaacatttggcaccagagaatccttcctc
aacccccacccccacccccatcccagggccttcctccctctttcactgggtttcgggtgg
gatccatcttgctggctgctgcccactaggtgccaagccacagaggtctgtaacaggtac
agaaaaaaagaaggcaggaaagcttagctcctccgctgcgtgcgggggcagcccgaagag
attcaattcagggaaggtctaatcagtttggtttcaagtccactgttcggcaaaagcccc
ggaatgctaattggaaagtaaccttggaaaccggagcctggtacccagcgaatgttgtac
aaatgtggctggacctccgaagggcacgtccagggcagcatttcacaggctccaggcgcc
tttgtgtgggagattttattttccacatttatctctgtaaaccctctctgtcggctgtca
cctactgaatatgtcaaagtccccagaagatgggatatggtttgtccattgctgcgacat
ctcccagcctgttcctaaaatacggaagccacaaaacagagtgcctgcaaagcagaagtg
tctcggatgatgggggaggggactgcccctctgtggctgtgtggataatgatgtggttat
gaggaagcctagtattctgtggctctcagtgtgtctgtcactgaggcctgggatacggcc
tgacatgcaaagcttatgctgtgtgtcctctatgagtttgagcaggtcccccaaatttca
tctcagtaacatgacagaaatcatttaggatcccggggagaaaaaaaaaattgattagtc
tcaagaactatgaaaccatttctgcttgaccccagaatcctgaaggagtcaggatgctcc
tccttaggaaaaacaaaaacaaaaacaaaaaacaaagaacaaaagtgcagtaaactgtag
ctccgggagaggagacttccgcctctcagaggctcagagatacacattctgaataagaga
agagtcttttctattcacagcgattctgtgctgaatagagattatgtaagtgcttgaaaa
tagctgttttaaaagacaactgcagattaaaacttcctgactttgacatctcatcatacc
gagttgtttatgaaaataagattatgctgtgctcattagcatttggcacttatataaggt
ttcaatccttgtgtttggtacggaaaacacacaaactactctatctcccccagtttctta
gtttcctattacatcatattttgagacagggtcttactgggcagaccaaacttacctcga
tatgaaaagcccaggattgtctgaaactagtcattcccctgccgcagactctcagtagca
aaatgcctggaatgtcccactccccttaggtctgccgctttaaaatttaattggctttta
attccttttcataggtatatagctatatgtcggtgcttataaatattaatatgaagaaga
gaggtctcaatgcttaagagagactccctgctctcccagaggacctgagtttgattccta
tcgcccatgtcaagcagttcacaattgactacaactccagattcaaggaaacttacttac
attagctgacagaagctgaaagagcagtcagtgctcttacccactgagccatctctccag
ccctgggtttcattcttatccagagccttggacatgaacatgggcctgtggatatttgta
tgctgatgactttgcagtgagatttctaaacatgcaggacccacccaacagactgtgtgt
tcccaagaacacaccccctgatccaggaccttccaaaaggctctcgatgcatggctatgc
ctccgggaccctgttggagagtcttgaacccctgacaatcccagccagagctctggtctc
agcaaagctcccatcttctgtctcccacagggtcctgtggcatccacagcgtcagcgttt
tccatcctctcctctgggcctggtctcccgccaccacctccaccaccacctcctcctggg
ccacctccaccctttgagaatgaggataaaaaggaggagccctccccttctcgctcagct
ttATTTGCCCAGCTCAATCAAG
Primer
(+)CACGAAGACCATTCCAGACA
(+)CTTGATTGAGCTGGGCAAAT


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