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Mouse element [ mm8 ]


Position: chr4:139,774,060-139,775,558 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Igsf21(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
atCCAGCCAGCTCCATGAGACAcagcacaccaatttgaagccgcgacagtcctgtgtctc
actgaggccagtactgacagcacttattagtaattagtaatttagccatgcagccaaaca
cctgcacttcttgctgtctcttctgcccagtcaccttccctcccacacagggcaccccaa
cccaggtctccaggaccttccaggcaccccagccaccctgcgctcgtctttctacacatc
gttacctccccctccccccacccccatggccccatggccctgcaggctgctggtctgtgt
accagcactgactggcagagctcagaagcacatgtgtcctagtgagatgcattgcaaacc
aatacaaacccagaaccctgtccctgcactcagcctgttggggacctggggatacagcca
catgccttccagcaggctgcctcacagggccccaggcatggcctgctcaagctcatgcca
tgggctttgggtctgagtttgtagcaaacactggtccttttgtgtggggcggccgcgcca
cactgcatacaaatagagcctcaatcactgtcggcagcaaaatgttccctaagtgggcca
gactcccctcttccactcatttttgcttccttggatgtggcctctgagggcccctctggg
tcttgctcatttgggtccatgtccctttatcctgtaagcacaccttgcccaggacaccag
agacaatgcagagaataaagcaaaccagatcagagcctgtatgccgagcctaactgcctg
gggttcaaatccaggctctaccactaaccagccgtgccacctcaggtaagttacctaaca
tctctgtttgcacagctcctcaccagaggtgtggggaaacagccaggaggccctagggga
gctgaagccacaagtgtgtgggtgagacagagaggaggtaaggtcacagaggcagcagcc
tgcacatgctggatgagctgcgggattaggagtcaagtacaacagccttggaaggtttca
gcctggaagagattggatctgatttacattttaataatgtgtctctgggcaccgtgagga
actgagacagagggtgagcggcagccagggccagctgggaggaagcagatggtgacctgg
ggtggggtggggtggggggtggtcatggcaacagagagaagcagccagatttggatatgg
ggtgggggaggggtgactgaggagaggctgcgcatgtggatccggacattggtttcactg
tgtgactttgagtagtcacctaacctctctgagccctccaacctgggggaaaccatgtga
ccttcacaggatctgctagaagctagttaaggttgggaagggtggtaagggggtcgggac
gggatggaggatggatccctacagactcttgagaccctccgtggcttggccacggcacag
gctggctaggagaccccaccctgctcctctcgctcccTTTGAATGAGAAGAGCCTCCTC
Primer
(+)CACCAGCCAGCTCCATGAGACA
(+)GAGGAGGCTCTTCTCATTCAAA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.