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Mouse element [ mm794 ]


Position: chr14:25,468,997-25,471,496 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Rps24 - 4930572O13Rik

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CATTCCCATGGAGGACATTCttgtgtgtgtgtgtattcacactcatgtgcatgtacatga
aagccagaagtcaacttcagtgcagttccttaggcgccatccaccttatttatggagaaa
agtttctcactgccctgttgcttgccaggccagtgcctgaactagctcagctgctcagtg
agccctaagagtcagcctgtttctgcagtgctgagattccaagtgtgtgccatgatagct
ggcatactgtttttacttggtacagggtatcaaacgcaggtcatatgctgtgcagtgact
actttacacacagctgtctccctagccccatgtgtaacctttgtcatttccttgcatgag
ttctagacacagacccagtgctccagagtgagtccccttttctaagcttttaatgaacat
tcctggtatccagatcttcccttcttatctgggctcaatgccaccttgcagcccacaggg
gacacagagggaccagttatgagtatgctttgggggtcttggaagttacccagaaaagca
gcctggaggaggcactgagcagaacccagagtgacagatggacactctctgcaggctcac
agaggggcttctgcagcttgctaggaggctgtttctttccaggttcttattcttcaaggc
ctgatggaagcccaccctgtcctcaaagccttcctgggcttctatccttgcgggctccat
tgcaaagctaattttgtctggtctgtgctgcctcctatggacagtgattgtaaaagtcag
tgtcgcccataggacaggtggcacacacaggccttaataaataaattaatacatcaataa
ctggctaggggagcctggacttgagccctatctctacagtgacccccatgggatccatgg
ggctctgtgcaaagccctgaggtaatcatgagtaggaatgagtaccccaggaaccacctg
tctcccctctcagatctaggtttgcagggagccactctctcaagcctgaggccgggctgt
ttgcgctctgcacagggatgtggatatctctgtgcctttcccttcatccttccaggagca
ggtttccggagacaaatataccctccgcaccagcccctcgatctgtctaaacacaatttg
acatgcgttgctattagcttagcaccttatcaaataatgtggcttgatcgagataaaagg
ttttacaaccctggctgcctttgtttctgcctgcattcacccgccgagacagctaataat
taccaccaaagacaaagagaaatctatacgcacggcttccagctctcgtgtgcatgttaa
gcagcggcaggagagagctgggaggagccggctggcgtttggtcttggccaatcctaggg
gcaggaggccagccccagaacctggcctagttgaggtagccagtggtgagctgaaaggaa
agacagacggatatgctggagatggtgcagccctcgaatgttggaaccctaagtctgtgc
tactaggagctctttgatcttcactgaatctctgctatgggtctgccacaggagtcaaga
caccttggctcttgggtgagcatgctgtctagctccactttccccacccaggaagttgaa
gggttgtgggtggtggaaatggtcatttcaggcagaaaatggcttagatgacatcatcta
ggtctgtatcatggctaaacctgcatgaggccttgaccacgggtgctgaaggaggagaca
gaggccttaacttgagactcttgggcagacagtcttcccctctggggcagcaaacatgga
aggtgcaaggagagttcaaggagagctctaggaatgaaagcaagctgggaaagcttcctg
gaggaagagggtttgagcagtacccagatggatgagcaatgatacaggttgtgtgagaaa
ggtgttagagctttgagtctggattatagtgtctgtaggcactggtggtctctagggttt
aacaattgccccagaaccaagactgaagggatatcttggagttcccatccactacagccc
ttgcctgctgtgagaggggtagaaccagtgacaagctgctaactgttgaaatgttacttt
agaaaacacactttagccagggctacacagagaaaccctgtctcaaaaaaacaaaacaaa
acaaaacaaaccaccaccaccaacaacaaaagcaactcccacgtaaacactttcactatt
gccaactccaagacatcagtaagatgtcactgaatgtagaaagggtagagatgagcgtgg
gtggctcttgtgattgagtgaaaaccccagcacagcatgggttggagtttactgtggact
caaggagtcaagtcagtagcctccaaggcatcagtaatcaagaagatagagcagcacaca
ggtctctttcacccccacttgctcctatggcagacatcactaatcaattatacttttgtc
aagctgaggatccttctcatCCAAGAAAGTGCAATGGGTT
Primer
(+)CATTCCCATGGAGGACATTC
(+)AACCCATTGCACTTTCTTGG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.