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Human element [ hs790 ]


Position: chr1:38,662,809-38,664,040 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MIR3659 - LOC339442

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
agggAACATGAGCTAGGCTGAGCAAGaaacagtgaaaacagttactctcaactttgcaca
gtcccaccaaagagcggtggcatcttgctgtgtaatccagtgaactggctgttttggatc
cgataagaccctggcttgaaaccctccaccagcaaagtgaaggatggcattgttgtccat
cataaaaatcaatggttcttttgctaagtggccaatatttatttggctttagcattgttt
aattcaatgcatcaattaaagacagtgtaatgtctgctctggtcttcagcctcagcttct
gtgtgtcgttacctcatctgtttgagatcactcacatccttacgtctctgctcctttgtc
cccttgcgtaactcaaggacaggagtaattgacgtgaaacttttaaaaattaatttcgct
gcatatgtcactgagggagagtgcaagtcctcccagccatttataacgtcacggtgattg
gtcctgacaaaacaataccttaaaaactcaccaaagtaaattatggcccgagcaaatggc
tgctccgtggcagggccggaggcttggaggagagccaggcaaaaacaaagtaatgtgctt
ttgatattaataacagagatgatattgatctgcaagctagtgtcacttctccactctggc
gaggagattgctcccggcatttagtccactgaaagccactttccattcaggccatttaat
tttgtgagtctttaattatgtgaaatggagtctagttaaagggccaggtcccagttttgc
caggcggagacgtgggctgtgattcaggaagctgtcagaaatgaatataactcaattctt
agacctgcaaatgcagtagtctttctaaatgtttatttcatccctgcacttctctggcct
ggtgccattgtgcatcaggacagacacagactctgattacaggatcacatttttcaaaga
cctgaagttaatgtgcctgttttctgcataataaaagtcataactcacagggacctccaa
tgcctctcccctgaaagggggcctagacagactgcaggagggctgaacattccagcctgg
atagcgtgccctgtacctggcccagttttggacattcagtctccctgcggagctgtgacg
gaacatgctggcagaccacaagtcagaccacaggccagcccgtggggcagattatgtatc
agaggttcacGAGACAAATTGGGAAGAAACCC
Primer
(+)caccAACATGAGCTAGGCTGAGCAAG
(+)GGGTTTCTTCCCAATTTGTCTC


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