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Mouse element [ mm786 ]


Position: chr9:54,182,839-54,185,364 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gldn(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CACGACAGCCACAGGTTTTAtcaactaatccataccatggaagagatataaaagacaaat
tatggcctacaaatactaaccatctggctctgtgatctggcgtgttccggatgatatgac
cttagctataaaagccgaattctgtgcgcacagcctattgttctctgagtttgataccat
cctatgagagtacatttggccatatttctcacgtatttgttggatggcgcccaggggaga
agacaaagagccaactcacagcctctccatgtccgaacttaggcctgatcacactgtccc
caaaggatgtagttagagtggctggtggtaataagagtggcttcattccagaagggtctg
acagtacacatcagttggcaaaaagctaagagccgctgctttccttcatcaacactaact
gatgagttcagtagtaacctctgtctaccaagctgggggcttggggctcaaaggaagagt
gaaatgcagtataggggcagcagtggtcttggtgctcaggaagggataggaggcagcaag
ctgtagctgtccaaacaccaaatatttgttcctggggcaggcttgtgcactttgatttta
taaatgctaaagagcaaggtgggtgggaggggacagatattctctcggcagcctgaccgt
tcacgggcagtgctgtccttgctggtgggtaagagtctccctcctcccctcccctcccgc
aggcatcatggtgaaggagttcaaagacctgccggcgctcctcaatagcagcttcaccct
cctccacctcccacattatttccacggctgtgggcacgctgtttacaacaactctctcta
ctaccacaaaggaggctccaacaccatagtgaggtgagccgccgtgccgggccatggcgt
gcagtgtcccccacagtgtgcacactatgtccctcacagtgtgcacactgtgtgttgtct
tctgccattgtctagatgtgttctgtcatctttatgtgcctaggcagatcaatcagggtt
tgtccccctcaaaggaatggtagaatacagtgagggagtcccacacccaggcccctgatg
atgtgcacctgtcacagagtttgctgttgtgagaaagatggtcgttgttatactcagagt
gtagtagtctaccacagtcttaccaagttgcctaggctgctcttaatttctctgtgttgc
caaagaaggccttgaacttgctgttatagaccactcacaagtgttacataccaccagagt
tcctttatttaagcctgtgactaggcattgactcctgccacaaagaactcttctccctat
gtaaggcagaatagggtttataaagaaaacccagaattacatcaaaccagaggcagcagg
gggtcgacattttcaaaggtttcagctcagttgataaaacagttggtgttgtgaaacaac
aggtagaaacaacaggtacatgagagcactctgctctgcaggatgtccccagtggggact
gcggagcagtgaggtgaggtgcaagctggagttagccaaaactaggaccaaaatggtcac
ttgggggcatttcacttataatccttccacctcagcctcccgagtcccccagattatagc
tttgtaccacaaacaggcttgggtgggctgtgctgactgggtaggggacttctcctcagc
ctaggcctacaccaaaccacaggcctagagtaggaggaggagcagggtgtatcgaagctg
cagtttctgtggacagacagacacctgctccctcagccctggggctggaccacaggacag
agttgctagcagtcaggcgctggtatggctgagtccttcccaagtgcttgctcttctcag
acccctttccagtttaactcaggtttcttagtctgcttctgtttgctgtgcttcctaaat
ggctagcagtcatgggatcctcctgtgctctgccgctcaatagcgccctctggtgttttc
ttttagcccaatatccctgacttattcccagattcagctagtggttgaatcataattcac
ttttttgatattatttctgtttggagtcttggaaatcagatcccagagctaatgggcatg
gaatcccacacaagaaaattgttttcacaacctttactatatctcttctcagctagtggc
ctttagtttaaatttctcttctctctctctctctctctctctctctctggatattttatt
tatttatatttcaaatgttatccccttttctggtttcccctctggagactccctatccca
tcccccacctgcttctatgagggtgctcacccacccaccctacctccccaccctggcatt
cccctacactggggcatggagccttcacaggaccaagggcctcttctcacattgatgccc
aaaaaggctatcctctgctacatatgcggctggagccatggattgctccacgagcactct
ttggttggtggtttagtccctaattaaaatttcagcatgaaataaaGGAATAACCAGCCA
ACTTGG
Primer
(+)CACGACAGCCACAGGTTTTA
(+)CCAAGTTGGCTGGTTATTCC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.