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Mouse element [ mm758 ]


Position: chr10:79,302,606-79,305,114 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 9130017N09Rik - E130317F20Rik

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
agaaAAAAAGAAATAAACCATGGAATGAAgttaggttcccttttagtctctctatctttt
gtttttggctttttttgtttttgtttttgtttttcgagacagggtttttctgtatagccc
tggctgtcctggaactcactctgtagaccaggctggcctcgaactcagaaatctgcctgc
ctctgcctcccaaatgctaggactaaaggcgtgggccaccaccacccggcacatctctct
atcttttgagtcaagcttccactgtgtcgcccagtagggcctcaaattcctgatgctccc
gcctggctatggcttggctaccaggagtgacccactgggttccatctcctgcaccacaca
aacagaacttggtggcacgtgaccatcatctcagcaatcaggaaatagaggcagaaggac
caggtcatcttcagctacatgtccagtttgagctagccttggctacatgagaccatgttc
aaaaaggcaaaaatcaatgcaggcagcaggcaccctgcatagcccttccttgccctgtag
tccttcaagcttggcaatgtctaaggagccactagggcatcaccagagacagatgggaga
tcacatctaaacctccaaactcagaaaattgggccaaagacatccctagcaggtttttcc
agccctcagaggcagtaacgtgcacctgaattgcttgaacttgctggaatttcttccatg
gtacagcaagcagactcatggctgtgtgggacgtagacaggaggagtgtaaagggggaca
gggatgttgagggatatgctagtgtttggatactgggttccagcccagcctgtaggtggc
aggaaccccttcttcctaccttgatgctctctggtggtatagcccctgcctagaacccac
acagcgaagggctggaggtgtgaccacaaggatcctaaggaccctccctgcctagaatcc
tccagttagagccctgtgtgtgctcaggggtggagccctgcctagaaccccgcagtgaga
ggctgggagcagactcagtccttagctcgactctagccaagtacgcagctcggggtttat
gataatatatggaagagtggaagaaaatcacccgctgtggaagtctgaggaagtgggagg
gactttgccgcggaatgtctgtgcccacgcctgggctgtagtggtagtctaactcctcac
accccatcccccaggctccttccaagtccagacagagaaaggaattcctggctgagtcta
atttaaaacaaacaaataaacaatgtttgcagggaggagaatgagaggaatgcgggcggg
gctcttccctgcgggagaaccggagaactggggcctcggactgcaagaacagaggtcacc
acgaccccagcaaactcccaccccatctctgcaaagagctggaaagcactgttaagccca
ccccgaccggccttccagggttattctgttgttttatggcctttttgctccgctggctgc
aaattgggggaggggagaaaaaaaaaaaaaaaaaaaaaacacgggaggcggggtaacgac
agattccggatccctggtcccggaaacctttgtttcttaaggctgggcagctgctcctca
gagacagttagggctctggacttggagcaccggtcagtgtttttacttcaaggaaagctc
taacctagagcaagagcccaaaatttctcaggtagtttgaaaaacagtgaggtggttttg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctttctgaggtggttgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctttctta
gtacttggtaagctgaagcaggaggattgcggcaattttaatgacaactgggctacatga
gaccttgattgtctccaaacattgttggtgcccacctgtcatgccagcattcaggaggtg
gaggcaggcggatcaaatgcaaaagactatcctgggctatgtgagaccctgtctcaaacc
ctctttctcagattaaaaaaaaatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatattcatattccaaggttgagagcacgccttggtg
gtgaggccctaatatcaaattcccagtgctgaacaataaaatgaagtgttactcagccct
ttcctgatgcatctctgaattccacacactatctgaaatccacaaaaaataccatcttag
aggcccaggtttgcaggtaacaggaaagctaccccatgcttgtttttctagcagggaatt
attttatctggatttagaaagcagcctgctcagagtatagagcagtgagggaagccctgt
gggcctgtctgattctagaattctccaggataaagtctgggaactttaaccctgttggaa
ccacagggaagttggggaagcaggcagaaTGAGTCTCGGCAAGGATCTC
Primer
(+)caccAAAAAGAAATAAACCATGGAATGAA
(+)GAGATCCTTGCCGAGACTCA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.