Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs739 ]


Position: chr3:147,793,207-147,794,247 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ZIC1 - AGTR1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
tctaGGAGAAGACTTTAGGTTTGAGAAAtctacaaaggggtgtgagaaacagaactgcag
attcccattcaaaaccataactatttttctgtctttttaatgctgtcatgtcaagacacc
tgcaactgagatgatatttcctcgatggtctctgggcctccttctaaatcaagagtggtg
atagccaacactgctttgtatctgcgaaacaaatagtggcctttgtccagcacaagtccc
taaacaaacttaatctctctaacactgtgacagatgacatttagatgtccttgttaccct
taaaatgagttttattgacaatcagagaacaaaaagaaggcccagataaagcccaatgtt
ttataggcttgctaacaacatcttagtccagagggtgaggagaaagcctgaagttgcccc
cattttcccctgctttgctatatcaccatgacaacagatatagaaatcacttagtgactc
ctagaaagaaaacacagtgacacagtaccccttgtatggcgaatcaaactaaagccttca
ttcaaatggctattcagcttgggcattcatgtagaggatagggtggattttacacaggta
actacaagagaaaggccagcaagccctccagccacagcatatggcaaagtctctgtctaa
ttaatgcatcctcaatagaatttatccattttaaatttgttttcttttacttgaaacatc
attaatgtaaagggcaacattaatcaacatcatggaacttaaaagggcattaaagagtga
tctttttccctatgcaacaagaatcttttcaagtagttgtgttaactgcagcagattcaa
ggcacattctgagtttgtaatcagaaggcaaatctagagaggcctctactggcgaatctg
tctctgtgcagttgtccttgcggaactgccctggaaaaacaagcaggagaatgactttcg
gcttttttttattggaaagttgcacaccagatggatgaccaatgaatatactgtataaAA
CATTGAATAATGGCATTCACA
Primer
(+)caccGGAGAAGACTTTAGGTTTGAGAAA
(+)TGTGAATGCCATTATTCAATGTT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.