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Mouse element [ mm736 ]


Position: chr9:109,795,468-109,798,972 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Cdc25a - Mtap4

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CttCTGCATTTTGCAGTGTTCCTCggggaaagtcttgtctccactcctcaccccacgtcc
ccatgacagtggctggtgtaggagtcacaggaaggcactttaggcagcttccatcaggcc
agtactggaatgctgtagtgtgccccaaggtggaagagggggggcatgaaagagtggagt
ccacagagtgagggaggagcatgcccactgaatgtccttttaaaaaaaaaaaagtcattt
tatgagtcggaatatccaatcagtgttgggtgggcacccaagggtgagcaggggggcggg
aagcccaggctgttatgtatcctggcctacagacaactgtggaatttctcaggagggcgt
agtaaattttgaagtcaaaggttcagagtttatcatgttttaatttgagggtcagagagt
ggtgaatcacatcagttaccccctaatctaatcccatggaagtgaggctctcggaaacac
ctctcgtctgaggggccaggctgctttgattctgcacagcctgttttggtgcctgcctgt
tgatatccttggacaccagcctctctgctatctttgctccattggggtctagccaggttt
ttcttaggaagagtctcccctcttccctctgctttctattctgggggcggggagggaatc
agtgatattgaagatggctagttgctttgttatgggtttgagttgcatttggctattaaa
caaatcttgtttgaaaatatgtggagagcaagggaatgagcagccccttccctggcgtgt
tgaagtatgtcccagttggtccctggtctggtttgtagagattctgttagctgaatgctt
tccaggagaatggcttgcagattgtaccagcatagctagcattgttaaccaacagttgca
ggctctgcaaataaaagtgatcttgaacccttgttctctgcctagttcctaatatactca
actgggagtctcatttgcctttagggtcccagggtcacatagctaaattaagccagccat
atttcttcaagaggatattaataaaaaaaattcagtttgcctttaggaatagccgaaaca
atcccccaaaaacaggcggttgacaggatgaaatggccttctaggtcagtcagagtcgca
tgatgggacctattaaaatagttttctcagtactccatgtggtcttacagcctagtcctt
gggttgctaaaggcctgaggattggcattcaaggccatcccccacatgatagagaaacaa
ctcatgaattatcctctggctcccacatatagtctgtggtgtgtgtgttcataccaagta
agttttttaaatgtaaatttcttagtacttgggccaaggtgggaggatatcagattcagg
accgccctgatctcaaagagattccaaggcctggggtggacctcggtggtagagggctgt
ccagcatcagttacacatgccagtccctgggaaacaggaggagagaaactaaaggtggtc
tttatcctgacaactgttttgcttggtatttcaaaggaaatattggggggaaagtgaggg
agggctatagatagccagggtgggtgtgaacagtggactagccaggtagcctagatggct
ggggtgcctgctgtagggaaatagccaggctctaaacattaactcatcccaagcaaaccc
gaagagccagacaaggtgaataactgaggcagaaactgacagcagacgggccaggactgg
tgaactgggatcctgtgagaaaaccttaagaccttgggcaaacagagactcctagaggtg
cagagcccctggctgaactagggctcccagaacagcacaaacagtccctccggtgaccct
gggaagccagcccagctctccagtcagcctctgcgaggactcccctttgtcttctcagat
ttcagtcagcactttgactgctgccatagctacactgtggccacaagatggtggtggtgt
acccagtttagttccctcacagagggcttgcaactcctcccaggaaggcagctgagaggt
gacgcctgggccttccttccttgtagctcaggttaacttagttgttagaccccagcccct
tatggtgtattcgaatgacacagtgaagggatccacttcagtttgctcttgttagatcac
ttattatttctagtctgtgtgaagatgtcagattccctggagctggagtcagacagtggt
ggcagaggtgcaactgttgggaattgaatctaggttctctgtaagagcagccagcgtact
cctaaccacagagctatccagtcccacttcagcctttttgatgtctaactccacaaacta
cctgggaggctgaaactgacagaatttggaatttggggcaagaatttgaaatatatagat
gctgctctccttctttaaagctttttctttttctttttttttttccaagacagggtttct
ctgtgtatccctggctgtcctagaactcactctgtagaccaggctggcctcgaactcaga
aatccgcctgcctctgcctcccaagtgctgggattaaaggcgtgcaccaccacgcccggc
ttttctttttgttagaagtaaataaattcttaaaaagagaatcactagtccagataagtt
ggagacacccacattaaacagcttacttgaggtttggtttgtttcccaggccttttgcat
agccactgtttgtaggtttggtgctgatgccgactgcccacgttttatgaatgggaacac
ccatgctccattagttcctgagttcctcttgttactcattaacaaatggtggaagtggga
gtaggcctttgctctccggttccaagtcctcggctctttcccaactttctcttgctttca
actcgtcttccaaagaactcagctagtgagcttgtttcttgcctgaccagtacagtatga
aaaggaaatgtttagggaatcaccaaaggatggcattgcagctagtcactgggacagagc
tctgtgtcagagtgactcagatcgagcctgaggacttctgcagcctgggtcaattgagag
accctgactcaaagagtacaatggagaaaggttttgaatcttttttttaatcttcttttt
actgctaaaatacttgcacaaagaacatttccttcacccaacatagaactgcagagtctg
gaggacaggtccaaaaattagggtgggaagatgctctcaccgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgttttgagatggtctttttatgtggtcctagctagcctcaattctctatgtagatcagg
ctggcctcaaacaaaggtccatctgcctctgcctccagagtgcagggatgaaaggtgtat
atcatcacgttcagcttgggcttttttttttttttttttttttttttttttttttaattt
agaatGATTGCCTCTGGACAACTCC
Primer
(+)caccTGCATTTTGCAGTGTTCCTC
(+)GGAGTTGTCCAGAGGCAATC


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