Mouse element [ mm727 ]Position: chr7:75,272,248-75,275,752 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: Igf1r(intragenic) Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence tgCCTCTCCGCTCTTCCTTTACCAacaaaccatgctagttctagttttgtagctaattct ggccagagaagtaagaacggaaagagacctctctgctcttggtacacagtgtagttggtg ggaggttgtgaaaggtatgccaagagaggaagtgattttaggcagagtggaaatttgcca agtagagaaaacagagttgttgacccagcagagaaaacacattaattgcacgtgtgtaag gaaagattttcaggggtaggcatactcaggatgctagggaagaatcctagaaatatttgg caagtttgcagcgggcactttagtagaagcccatctccactgaagacccaaatctgaaga taataccattccaggcctcaggaagttcagggtcttaacgtaggagtggagtctaaatac agcattaaagccctatcagagacttagtgctaagaaaacaaatttcagtcttctgcaaga agtggggtagctgggccagggagaacggtggagaacagtggcctctcctgggcaggcaga ggtaaagtctagaaagcataaaaaccaacgttgagtaaaatgatgtgtgtggtctgggca gggacctgggaacagaacaaagtgtccagagggagggtgcctacaatgaaagtagctact ggtttggggtctgatgccaggctgcaaggaccaaggaaagcctaaatccatgttttatac agcaaaggtgacttggggtgaacatttactggggttgcttgtggcaggctccataggaga tagcagaggtgagggactagaatggcaaaggagaatgccaggtggccagtttgcactgtt atctcctataaagtacccgttatcgatatatcgtgataccgatatatcttgattgtgaaa agtgacaacgtggtctctgtatattcaacaagcattgaagtggagagagccggcttggct ggcctcctggtccccttttacattgaggaggcttgctcaggatagcgacttgtgagcatg tttatgtgcggggtgagcagagccccccatcctaagagcagatggtttcctccgcctggg gtcctgtaaggatggtgaagctggagtgagggaatgggagattcaagtgagactgccaga aatactatgggcaaggcaagttaaccgcttatttcttatcaagtggtcccaacgccgtca tgtgttgtttctttttgtgtatgttctccatcccagctgctcccaataggctcagagctc ctaaaacttgctatcaaaagatgtagctgtgtgtctggtgcaccagcatgccattaatgg cgtattgtatagtgcaacaattttagtgtgtgatttaaagcaactttcgtaaaagacaat tttaaatttttattcgacggtgaggaaggggcttctggacaaaagcgactaaatcggtta tcattccattggagacttcgtcagccatacaagaagtgaaaatgatggaaacaaaacctt tgaggttctgcacaaaacaaaaaaacgatgtgtggcttaaagtcagcagttctggctcgg gggggggggggggggggctccaaacgacgcctccaggtgctgacttttggggccaccccc ttcctgccctccccgctgtggcagccaggattccttttgtctcgggtgcttccccacccc gccctgccagccagagggagctggcaccgggcgccctccccaccgcccctggaccaaggt tgtttactactttctactcggaataacacgccaatcaccagggcccgccctctctctcag ccaatcagtttgttgggaaattccacctttcctaagggcccaaccagcgattggctgcag gacttgtcagtcaagctggcatcccgcaaggatgcagctggagtattagggacgcgatca ccagagccgaggaggagtaaccttcccataaacaagatggggggccccccaagaaagcac ggattggggtggggagctgaagctcagcccaaccccggggccccaccggagtgaagaggg ccgagcgcagagccggggaatccctccctccgcctcccgcccttgctgcagttgtaaaca cgcttccctccatgtctgtttttctttctctaaccgtggccattacaggctgctgtttac aaaaatcctgcagggcagtgctgttctctaggatcctgtcctccattcaccttgcctcag gaccccttttcaggctttttttttttttttttttaattttctccccgctgctaggcacaa actgaaggaagctattgggtcgtgcaagcttgttttccttttattgcagcacgcaaagca agtcacgctgtagcagcagcaccatttcccaggagaacaggctggctggccattaagagc accgcgcagcctaaacaggcgtagctctagaaggactggctgggtttttgttgttgttat tattattactggtctgagtcaagctggatgctattttgattctgcattttcttccaaaat tcgtcttgaaatctatccccacttacaggtttgggatttacaccaccacccggcgcacgc cccttttcataaaggcagtattgtgttgaactaaatgtttttctaccttctctgatctga atcaggtttcccatttctagcagcacaatgtagttgtattctgtgtggtaggggcgtagt ggacatgaattatttgcgacagggttgcctggaagatacggagtggaatttgcgtggcac ggaacagttcccagtgcccaaggtttctgttactctggctccaagcaggaagcgcaggca atatggcaaaacacagcacgtggcatcccattcaaaaacgctcttttctagaagctggta ttgcagaggatatccgatcttgactagtttcaccaccaccaccacccctttcacaagcag aaagaaaaactaatgtacggaaatttggtgtagatatttagtaggaagctttgttaagtg taaaggcaaggtttggaagttctggcgagaagctgaaggaccttgtgggcacgctttaca ggatttaaggttgtaggaattgtaacccccacatgggaggccacggacctctgggctcct ctagacttaacaccctgcaaagttactgagctacagagccctggaggatcttagggttga tgctgagggagaaaggaaggttgctgcaggtaggaatgtgggtggccctagcatgttctg gccaggattggatttccaggagtagcttctatggctacctgtgtgagtttgtggaagact ccagtcttaagttatgaaagcctggttaggatctcagtggatggttggtcttttttccta cttactcatttgtttgatcccaagccccaaaccacccccccccctttacacacacaagca gctttccccaaaatgaccaagttagtatgtaacacgctaccgttatatactgagctgtcg tcaggATTTGAGTGGAGGTGGCTGTPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.