Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm727 ]


Position: chr7:75,272,248-75,275,752 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Igf1r(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
tgCCTCTCCGCTCTTCCTTTACCAacaaaccatgctagttctagttttgtagctaattct
ggccagagaagtaagaacggaaagagacctctctgctcttggtacacagtgtagttggtg
ggaggttgtgaaaggtatgccaagagaggaagtgattttaggcagagtggaaatttgcca
agtagagaaaacagagttgttgacccagcagagaaaacacattaattgcacgtgtgtaag
gaaagattttcaggggtaggcatactcaggatgctagggaagaatcctagaaatatttgg
caagtttgcagcgggcactttagtagaagcccatctccactgaagacccaaatctgaaga
taataccattccaggcctcaggaagttcagggtcttaacgtaggagtggagtctaaatac
agcattaaagccctatcagagacttagtgctaagaaaacaaatttcagtcttctgcaaga
agtggggtagctgggccagggagaacggtggagaacagtggcctctcctgggcaggcaga
ggtaaagtctagaaagcataaaaaccaacgttgagtaaaatgatgtgtgtggtctgggca
gggacctgggaacagaacaaagtgtccagagggagggtgcctacaatgaaagtagctact
ggtttggggtctgatgccaggctgcaaggaccaaggaaagcctaaatccatgttttatac
agcaaaggtgacttggggtgaacatttactggggttgcttgtggcaggctccataggaga
tagcagaggtgagggactagaatggcaaaggagaatgccaggtggccagtttgcactgtt
atctcctataaagtacccgttatcgatatatcgtgataccgatatatcttgattgtgaaa
agtgacaacgtggtctctgtatattcaacaagcattgaagtggagagagccggcttggct
ggcctcctggtccccttttacattgaggaggcttgctcaggatagcgacttgtgagcatg
tttatgtgcggggtgagcagagccccccatcctaagagcagatggtttcctccgcctggg
gtcctgtaaggatggtgaagctggagtgagggaatgggagattcaagtgagactgccaga
aatactatgggcaaggcaagttaaccgcttatttcttatcaagtggtcccaacgccgtca
tgtgttgtttctttttgtgtatgttctccatcccagctgctcccaataggctcagagctc
ctaaaacttgctatcaaaagatgtagctgtgtgtctggtgcaccagcatgccattaatgg
cgtattgtatagtgcaacaattttagtgtgtgatttaaagcaactttcgtaaaagacaat
tttaaatttttattcgacggtgaggaaggggcttctggacaaaagcgactaaatcggtta
tcattccattggagacttcgtcagccatacaagaagtgaaaatgatggaaacaaaacctt
tgaggttctgcacaaaacaaaaaaacgatgtgtggcttaaagtcagcagttctggctcgg
gggggggggggggggggctccaaacgacgcctccaggtgctgacttttggggccaccccc
ttcctgccctccccgctgtggcagccaggattccttttgtctcgggtgcttccccacccc
gccctgccagccagagggagctggcaccgggcgccctccccaccgcccctggaccaaggt
tgtttactactttctactcggaataacacgccaatcaccagggcccgccctctctctcag
ccaatcagtttgttgggaaattccacctttcctaagggcccaaccagcgattggctgcag
gacttgtcagtcaagctggcatcccgcaaggatgcagctggagtattagggacgcgatca
ccagagccgaggaggagtaaccttcccataaacaagatggggggccccccaagaaagcac
ggattggggtggggagctgaagctcagcccaaccccggggccccaccggagtgaagaggg
ccgagcgcagagccggggaatccctccctccgcctcccgcccttgctgcagttgtaaaca
cgcttccctccatgtctgtttttctttctctaaccgtggccattacaggctgctgtttac
aaaaatcctgcagggcagtgctgttctctaggatcctgtcctccattcaccttgcctcag
gaccccttttcaggctttttttttttttttttttaattttctccccgctgctaggcacaa
actgaaggaagctattgggtcgtgcaagcttgttttccttttattgcagcacgcaaagca
agtcacgctgtagcagcagcaccatttcccaggagaacaggctggctggccattaagagc
accgcgcagcctaaacaggcgtagctctagaaggactggctgggtttttgttgttgttat
tattattactggtctgagtcaagctggatgctattttgattctgcattttcttccaaaat
tcgtcttgaaatctatccccacttacaggtttgggatttacaccaccacccggcgcacgc
cccttttcataaaggcagtattgtgttgaactaaatgtttttctaccttctctgatctga
atcaggtttcccatttctagcagcacaatgtagttgtattctgtgtggtaggggcgtagt
ggacatgaattatttgcgacagggttgcctggaagatacggagtggaatttgcgtggcac
ggaacagttcccagtgcccaaggtttctgttactctggctccaagcaggaagcgcaggca
atatggcaaaacacagcacgtggcatcccattcaaaaacgctcttttctagaagctggta
ttgcagaggatatccgatcttgactagtttcaccaccaccaccacccctttcacaagcag
aaagaaaaactaatgtacggaaatttggtgtagatatttagtaggaagctttgttaagtg
taaaggcaaggtttggaagttctggcgagaagctgaaggaccttgtgggcacgctttaca
ggatttaaggttgtaggaattgtaacccccacatgggaggccacggacctctgggctcct
ctagacttaacaccctgcaaagttactgagctacagagccctggaggatcttagggttga
tgctgagggagaaaggaaggttgctgcaggtaggaatgtgggtggccctagcatgttctg
gccaggattggatttccaggagtagcttctatggctacctgtgtgagtttgtggaagact
ccagtcttaagttatgaaagcctggttaggatctcagtggatggttggtcttttttccta
cttactcatttgtttgatcccaagccccaaaccacccccccccctttacacacacaagca
gctttccccaaaatgaccaagttagtatgtaacacgctaccgttatatactgagctgtcg
tcaggATTTGAGTGGAGGTGGCTGT
Primer
(+)caccTCTCCGCTCTTCCTTTACCA
(+)ACAGCCACCTCCACTCAAAT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.