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Mouse element [ mm690 ]


Position: chr9:68,642,365-68,644,871 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 9530091C08Rik - Narg2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
gAgCAAAACATTCTCGGCGTCTTccttctgctgtttgcaacactgactcacatttcttga
aggaggttcggcatctgctgtgtggttctcagtgtgacacaagtgggcttcgcttccctc
ccagggaaagtgtgcccctgcctcacctgttgagggcaggtgaggtgaacagagcttgtg
tgtgttgaggagcctggggaggaaccatcctggtggctctctcagtggagcagagtcagc
tgtgcttgtccccgcttcacctgcctgatggtgacacagaagtgaggttggaaaggttgt
gctgtgccttgaaatctcataatgacataaatgagccattcagtgcccgtggaaggagct
atagagagaattctcaaataacaacaacagcaacaacaagccacttttctctagtacgga
ctttaccagtgttgttgctggttcccacccctgtcatgccccgactctgtcatcatgttg
accctccaaggcacactttactaatggggaccagaactttgtggggacttggcagatttc
taaagtcccacttctggtagatgatagaaccagactttaaccaagatctgcctttctccc
aagcctgtgttctttccatactgcacagtctgctcccctggccctgccactttgtgcttc
cccaacacgaaacttcaggcaccttctggaacaagctgtttggtttctcgctcatgtggc
tttcttctttcttgcataaccaactcgcatgatcagcacatgtacacacagagagataaa
catagttaggagtgctgtaaggaagtcaacggtgggactgtagaccagagtggcattgat
gggatggataaccggtgcttcagaagccggtacggtctggaacccccgagctggcctaga
aacggcttgctaacagaagacatctgcgcctctctactttacaagcaccgtgacaatctc
cacaagccacaaggtctgaggaactgtaacatttatggctccctggccataaattcatgc
ggagcccatgaaaatgcggccccatggggttatggcagagatgcagaactgcaaacatct
gcacatgggcagtaaagctaacctctggtgcgcggccctccactgttgccgacatatatt
aacattagtgacaattgaatgtgattatctgggatgccattttatctgccagctgcagac
ttatggctcctaaagatcccattcctccctttcctcatatgttgtttttatgtgactcaa
attgtatgcaggaattcatgattactgggggcttccctcttacttcttagtggatgcagg
ctatgtataaatttccagtacttaaattgattgtagcttttagatgaaataggcccctca
aaagtctgtgaagcagctgcgcaaatggcaaagcattcattgttttatgtctgaagaccc
caccaagagcctgggggaaaagaatgtattttgacactggtgggcagggcttggggccag
caagtttgtgaattcatttttatgttagttgtttggagtttgtgattaatatgtcacatt
gtcaaggtttaaatctctgatatttcttttcgattattcaagttggttttatgaagtttt
tctgggctggagagtcaattctttaggctttgcgacttatgtaatttccatagcaattac
tgactaccatcattgtagagagaaaacagtgtaggcaatctataagcaaatgaagcaaat
ttcatggcttcattgaaataaaattttatttataaaaataggcagcatgatattatttgt
tgaaccttgcctcaaacacatgcagatatgtccagttattgggaaatttaggaagacttt
agaacttttaggaatgaacccgcatctcattccagttgacaatatccaaagttgcaaaac
accaattttaagttaatataaattgtagtctttagtctagcataagcctgcttaacgttt
gcttgcttttagttcgtccaatgcatagagcgctccagtcatagggatttgacagagtgt
aagtgttcagagggaatggggctgagagacatcagtcttgtagtgtgtttcattgagttc
ctttcatacagcttgtgtgtggtgtttgcgcatgcttgtatgggagtgtgcacatgtgct
tgtgggtttgcgtgtatgtgtgcctgtgcgtgtggacgccaaagatcaacgttggttttc
acattattttttaaaagagttattactattgctattggtattgttttaagtttgatgatt
ttcactgtgtatgtttgcatgagtgcaatgtctgtggataccagaagagatcagaaggca
ttgggatccctggacctggagtgggttcaggccctttggaagatcagcaagtgcccttaa
ccactgcgctgtctctccacctggcactgcttgtgtggcaggaatgtcctccactgagcc
tttcccctgcctttatgaagtcttgctTAAGACTGTGGGTTGGCATG
Primer
(+)cacCAAAACATTCTCGGCGTCTT
(+)CATGCCAACCCACAGTCTTA


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