Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm688 ]


Position: chr8:8,102,246-8,104,749 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Slc10a2 - Efnb2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GAGCAGAGTTGGGGAATGAAgtcctagcccctcccagtcccaccctacagacagcactag
gctgggcctgcaggtgaggacagctctgcagattgccctgagatgagttgcaaatgaaga
ggccattttaaatgcttcttttataaagaaagacacacacacacaggcacacacgcatgt
gtgtatgtatgtttaatattttctacctttctcacacctccttgctccctatttccattg
ctgagtcatgttcgcatgtacacatcccctacacagtctgttcaaactaaaattctctcc
catgcttacctccttaccctacactgctgagtctggagaaatgtctgttagcacctgact
cctcccattcggggattctgcccttcccaactctctgctccaaatggtttgcacagataa
cttcattgctcactcagacactagactgagtcttatgttcaactgccacattctcccagg
acttgtttcttggccaatctctctgaaacagcacagggcttttcccagcctttctcatgc
tgctccacgtttccctgctaggatggtttattaatatgtctttctcccagtagaacagga
acagaagaactatcgttgctcattttctcgctctttaatgctcatgcctaacacatagtg
gatgtttcataagagctgattagtgaactaatgaacatatttgtatgcacaactcatgct
gaagccaatttttaacccttaccatggtctggtgaggaggcatctgacacgttagggcag
ttttttcaaagtaatgaagcaatcatgctggggtcctgatacagtaggttttctaggctc
tgacatttgcactcctacctactaaacgtgcaaatacagagatgagatgaaatgaatgac
aggatgtaacacacacatacacacatacagtgccttctggtataatgccttctttaatac
agagaagagatgaaacacaggacatgacatacatacattaaatacaatacatacatatgt
aggtacgtacatacatacatacatacatacatacgtaggtacgtacagtgtctttgggta
caatcacttgtttggaggcatttagtttctaagaatccaaattaaaatagaaaactattc
aaaactgcaaattttctccatctaaagaatatagggtctaagtgtggttacaggtttctg
gggaaaagagagatggtttgcaggcaggggcctgtgagaatgtactttagcagaggtggg
gaagtgtggagcaaaggaataaaacagagaaaatgaaaggaagaaaagaaacagcttccc
ctaccagatgcatagaactgtcaaatacggcaaagcctgtaaaatggtcctctgctgtag
gccatagaagaggactgtaataaactgacccataaaaagtcatgtaaacattataacctg
tttttactaggtctttaagcacggggagcaattgatctaaaccagcttggctctcctagg
ttcctgagtctccgtgagaatccagtctccaacatgggtgttcaaatgcctctggcacta
aaagccaaaaataggagtgagctagaaaattgcagctatttagttatttgccctaggcag
agggttgatatttcctaagagcaaaacatctaaaaagagaagtctaaagcaaatgtccct
attcagtagcatgggatactcttactctctgtatctctgcctgaaaacacacacacacac
acacacacacacacacacacacacacaaacctttgtgattgcaagatgcctctgtgagct
gttcccaactatctgagaacatcagtattgggtgagagttggcacatccatgcctcagga
aagatcagtgcagactgtctctctctacagccctaacactttaagtatgaaatataaatg
tggaaatttcaagtaagatttttacaggtgtcaacatgaacagtcattccattacctcct
tgaggaatgcttgttaagccactcttgaaaatatccctttctctttctaaattcctagaa
tctaaatgcagggaaggctaagggcaattaggcacggagcctacagctacgtttgcaagc
tgtaaattttcagtcttgtttttgattgagttaatgtcagttcagaaaaagatggtcagg
cagccaggaacacagttttgctggtcctttgagagacagttgacaagcgtgaaaactcta
agaggacatatccaagcagaacaaaacatctccatctcacattgaacttgactgccactg
ctaggccactcatggtctggttggcagtcactctgtaccataatatggtggatggactga
ttaaggctggctaacatttcagttccatgaagcaaacacacctctgtagcttcctatgaa
aagccaagacttgctacctcacttctaagctgaagaatggtgacgattatgctcaagaaa
cgtatccaagttggggacatcCAAGGGAGGACAGGAGTCAGcct
Primer
(+)GAGCAGAGTTGGGGAATGAA
(+)cacCTGACTCCTGTCCTCCCTTG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.