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Mouse element [ mm681 ]


Position: chr6:99,836,857-99,839,366 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Prok2 - Rybp

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AATTTTGGCCTTGGAAAAGCatggccactcttcctgaccagggtctgtaatagctggaag
aaggaaacatctcttactggacaacctcccccgcctcccatggttgagccgattacagga
gctccaatgacaagagaccagtggatacaatccatgaaggtcagagaacaaagagtcaga
agctcattttaggagtaaggtcataagaggtcctttggatggtccaagatgggctatgtt
tgtagggacaatttgacctcccctaatcatcacatatcaaaggaaggtttacattttgtg
cctgtcttcatcagttttgtgtttctataacaaaatagctgaggctcagacatctttgaa
acacagaaccctatctggctcacagttctggtttctggaaggtccaaagcacggcgcctg
tatcctggtcaggttacccccacgcaccacagcacggccgagaagcagatggggagaatg
agcatgcgcagcagagtcacatgataaacaagaagcagaaagggtctggggaggggccaa
acttactatttgtgtagcaactactctctcagatgctaattggctcctaccagatctcac
ctacatctatagcacaacagccatccgttcatgaactcccaggacctaatgactgtctac
tgagctccacttcttaaaagtttgattcccccccccctccccacttctatgttggggacc
aggtgacgaacacatgagtctatggggacaaacttcatcaatccgtagcaaggtctctct
gtatattgcctgtttagtacttaaaggtcaattccaagaagcaagacattaatcttccct
ccaaatcaataaaggctcggtgattggattgttaatcgctcgtcccaggaagtcaagact
taaaacttcaatctccttgaaccggatggggtagcacccaggtccccttcaatgaatgaa
tgatctactctaccaactgttgctggctttaggtgggaaggatcacttccggtgaacaga
aacccacccctatgaccatctctccttcctgggatccaggaaatccagtgacgtcaggat
gacccattcccctgccctcccagctccagagtgcttttgagactggccttaatacagccc
tggaatgcatcactgctgggtctgtttctgactccccctttcctccggtgggtgtcccaa
ctgacacatctggcaagtcttaaatcttaacgcctggcatccacctgccgcagatgttag
acgctcccctctgagcaatgcttataaacaagactgcaaccgaccgtttccaagcagtaa
taagcaacatctgtactgctgtatgctccacccaacactctattctcatttaactcttca
gccgtctgaagaggttggcagacagagggcagtagccttgtctggctcacttcacaaatg
caagatctccaccatgaatcagtctccagaaagaaaaaaaaccctagattaggcaataat
tggcatatttcagatagtgattgcaaactctttttgtagaatatgggtgctctactaggt
gtttataggtggttttaaaagatgcaagtgctgttttcagaaaatactaggtttaaaatt
ggtttcttgtttctagggtgtgttgggcttttaatatctaacctgtattgttagtctgtg
aagatttttttgtgcagagtttatttgggtaatgtgcctacaaaaacaccctcaccctgc
accctacccaggcagcctgcgatggatggtggtagtggagagtagaacttactagaaggt
tctgttaggcagatacatttctcagctgctactttgctctctgcttattcgttcctctct
gatgataatctggaaaggcatcccagattaactctggaggtaaaagaagaggcaggtgtg
aagaggaagcccctggcaaagaaaaatacagtctgctagaagccagactgttcctggttt
aggagggtgaagccccggagccttggacctctaggctctgaggggccaggtaaaagcctg
agctttctccaaacccaggaggactttttccagagtctctggctccctggtccagcctat
ggagattgatgaaggcactgatttgttttttaaatttattcttctctcatgtatttcatc
ttgactacagtttcccctccctccttttctcccagccctgcttgaaccccctcccccttc
cccagatccattcttccttcactcacttcagagaagagcaggcctcccagggacatcaac
caaacacagcataacgagctacagtaagaccaggcacctctcctcatatctagactgatg
tttttaagaaggcaaatgagggggagagagataaacccaacccggcacttccactccagt
gagcccttgcagcgcctgctctctggggcttcggctgcagtagctcacagcctcccagtg
ttcaggctgacaggatgaggagcaggCTCCAGGCTCACTTTATCGCttca
Primer
(+)AATTTTGGCCTTGGAAAAGC
(+)caccGCGATAAAGTGAGCCTGGAG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.