Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm675 ]


Position: chr3:70,115,222-70,117,737 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Otol1 - Gm6634

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CtCtGCCCTGCTACCCAGTCTTTAaatagcattctagccttcctaaatcctgacaatgac
tacctaatttcagttaaaatacagttatagaatagattaagtgattatcatgaacataaa
gactagaatgtcaagttcaaaagaaacctggaacaaatggctaactattagtatatggcc
tattagtatactaaagagaatgctggtctccaggttcactcagtacctgtggctcctctc
agctcttcacaccctccctgctgtctgtcctaaatttcatagttcataggcttcccttcc
ccagctcctgattcctatatagcactgccatttttaccacgagccctcttgatcttcttc
ttccttggttccctttgctgcctttctcttcctctcttatcccaccctctcctctcatga
cccagttcagtattctggttatatttagtctacctactctccctgcactaaacaattcca
gatgcctctggctgtaatcttccttatatctacagtaaaaaccatctactcaaccattaa
aaaaaccttttaccattacttaaccatgaatcgaggtttcattcaactaacctgctaaat
attggatatcttcttagctgtttatatatatgccaacaatttatgcctagttatacccat
catgaaagacttagtttatttgataatagattcttttccttcaaagtttaccattagaat
ccatgatcatatataaattcatgcacacacacacacacacacacacacacacacacacac
acatacacacacacaattttcatggtttcccttttactagtagaaacatttagaaggtaa
aatcggtctccaactgaaataaaatgcattcttgttctcatcttgctcaaactccaactg
actgagcaggatctggctctgatcctagattctagactacttagaagggataacaatatg
ggaaagcttacttttgtaaatctgtgttccagtgtcgtacatcgacagttatatatgtaa
agaaacaccagggaggccaaagtgagaagaatctgtccatactggttggagaggctttgc
agtactcatgatgatttcaatattcttagctgaattcatttcagtgtttagggggcttcc
tcttgtctggctgatgctctcagtttcacctaaggaatctgacaaggaaatatatttagt
tgctatttaacacaatttacttacttttaaagtcggagataaaggaatccttttagccta
ctttactcatagaatgttcattactgtacttggagtagatgagcttatactatccttttg
tgtgtttcttacaagatttgattttgttttattctcattcacattgttacatcatcatga
cttctcaggcctctaaagtcagtctttaattagcccttcattccagttaactttaggtga
taatttaaacgttgagttcctggattcatgaattgcctgaggctgggttcttattgccta
ccaacctgcccataaaccggttttagggtttgtttccacagggatatggtacttacagcc
atgtctgcaactactcaatatctgtcaaaattctggttaggaacaaaaggagctgcttag
cttgttaaaagacaaagggagttgcgaggtagctcgtgcctatagttccagtacatggga
tgcaaaggaaggaagaatgctatggcaacctaggctatattgtgagttctaggacagagc
aaaagtattcctccaaaccaagcaaatacaaacaaaacaaatagaacaaaccaccaccaa
acaaacaagtcacagacaaaagaaagaaattagatttgttaaaatatgtatcaggtgggc
catataatctctaggaaaattagagatataggttgtaaagctgggtcaccatggacaaaa
tgttcacagcaccatgagtaatgcttcagcaattataccactgctgctgtccctgggaga
caactgtgcagcatatgcagactctagatattagaaagcagagactgttcaccctgctcc
ccaaagctgcttcttctctcatattctcagtaaaaaatgatctatcatacgagcatcctg
acggttttcatctgggaactgaacttttctgtgaacatacccgactggtctagcatagca
caagccagtgttctctctgaacgggtattaaggaaatgagctctggcttctaactgtggt
agcacgaagtagcaattaattgtctaagactgacttcctgcaggctagtctgtaggagaa
tttgcctccttcgtagcagaatgatttaggaactaaacattgctccatggaaactggcta
cagctcattgcttgaggtaatcatccttggtggagtgctgaggtggtacggcaagtctag
gggcttgaataatgctgtatccacaaggcctgcaccctccattacaccactggatggatt
ggttcttataatggtacagcttaaatgcctatggcCCAAGGACCAAGTTGCTTAAA
Primer
(+)caccGCCCTGCTACCCAGTCTTTA
(+)TTTAAGCAACTTGGTCCTTGG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.