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Mouse element [ mm670 ]


Position: chr2:125,317,131-125,319,646 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Fbn1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
aACaAACACCTTAACGTCCCATGCaagccgttaaccacgttggcaatgattcatttttac
atgcattctcaatctttcctaatgaggaatccatttgtgatgatttgaataaaaatggtc
cccatatcccctagggagtggcactattaagaggtatggccttgttggagtaggtgtggc
cttgttggaggaggtttgtcactggggatggacctgtaggtttcagatgctcaagccagg
cccattgtgtctcatttctctctctgctgtctatgtatctagatgtagagctctcagctc
cttctcctgcatcatgtctgcctgcatgctgccaggcttcccaccatgacgataatggac
tgaacctctaaaggtaagccagacccaattacgttttttctttttttaataagagttacc
atggtcatggtgtctcttcacaacaatagaaaccccaagacaataatttgtttttcaagg
aaaaacataaatgagaaataacccaacccaagctcaaacacaccttgagtctggctttca
cacattcagtcatgtctagattgtttacaaaaggataaaattatttgcatattcttgtaa
gagtcctgaaaaagaaatcaaaattaaaaaaaaaaaagcttattctattttaaactcatt
tttttcctggaagttaacgaagcacaggaagtactcatatttatatttatattttcgatg
tttttaaataaactttgattgtcatttgcttacccataatagcattctatctgacctcat
tcccacagtgagacatgccaggcactgtagtaggaactgcaccatgtcattcaatcttcg
gacaacacagaaaggtgtgtgctatagtcttgtttacaaggtaataaatgaggcttacag
aggtcaagccacttgtctgaggttttttcccagtaggtggtggagccaggagctgaccca
agtatgtctatccccacattcccgagcctccctgaaagcaagaccactggcgattagcgc
tcattgaaagtgagtcctctatcttttaaaacatagtcccacaagcaataccactctgcc
ccattacccacaaccaggctccaacaggaaacagtgtgaggtaattatagcataaccccc
agccaccagctctagggttttatgactgaactgccaaatcacttctagccagctctgtag
gaaatgttcagacactttctcagattccagctaaaacgtcaactgtgtggccctggggag
ttgagagctcgcagggtggtaatgggatataaaatttgcaaacttgaggtcagtggccta
aattctcgggtgtgaaacagcagtcggccgtgggaaattaaaaactacttgtggacttga
agggtgcgtgtcagggctccccttgcctggcacgtgtccatatcatctccgactttctcc
atcagcaagaaggatggctaaatggcaggtctgcccagaatcgttgagaagaaaagagta
ctatcaacggcttgagtcgtgcgttcattctgagtgctaaggactcaatccaattcaaac
acagctaacgctcaataaacagttgtcattaaaattaagcagatgttctcccaacgtatg
aggggggctggagaagacaatgcaagaatgcaaaaaaaaaatgttttcatcttggcgtgt
ttaatctcatagatgctaagtacataaatcagtaactggataacagagtatgcacattat
agaacaaaagcttaactaccatccggaattgtcctagcccacgccagagctcctgatcct
gcacatatggagaaggggtggggaagcagaggtgcatccctccttagactcactccctaa
gacaactcctgctttcctttagctaccccccaatacttttattaaattgggctcctttac
aaaactcctccttccccccaagactgcttaatggagccttctgtcgacagacaggtaaaa
gtaaatatctaaaactattgcatagtactttccaaaggaaggaaggaaggaaggaaggaa
ggaaggaaggaaggaaggaaggaaggaaagaagggagggagggaggaaggaagggaggga
aggagaaaggaagggagggagaaaggaagggagggaaagagggagagaggaaggaataga
tcacagttgggcacagtggcacacacttataatttcagcacttggaaggcagaggcaagg
gagtggctgacaagttcaaagtcaggctggtctatatagcaagttttaggctaacctagt
ttacatagcaagttcaaggccagcctggtctacatagcaacaccctgtttccagaaagaa
agaaaaggaaagagagaaggagaggggagagggaaagaaaaaaaggaaggaaagtagggt
ccttaatatgtcagggccttgcttgtgcctagaatattacaagacttgaagacacctgtc
aactctccaggatctgaacacaaagagacatgatgcGCTACCCAACAACCACTGCT
Primer
(+)caccAACACCTTAACGTCCCATGC
(+)AGCAGTGGTTGTTGGGTAGC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.