Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm668 ]


Position: chr2:65,830,185-65,832,690 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Csrnp3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCTGACCTTGCAAAGACCATcctgtaccatttagccacttttcttgatgctgagaaaatc
cctaaaagcagcaactcttggggttggggttggggtgaggggaggtacatatcctaactc
acagtttgagggtgcaatgcatcacacaagctaaggagtcatggcaggtgactccacgtt
gacaggagggtgaagctgagtcccctcagtccctcacatcttggtggaatgctaagcaga
gggaagaacaacccagggcccgagaatcagattcaaagcctaccctctagtccctaacag
tctccaacacggagtcacctcctatatggtctacaatacttcaaagcagcatttccatcg
agggatgggtgttcgaacaccggagcccctggggcatctcctattcacaccacagcgtca
cagaatgccatcactttagatgtcaggctttcagcaagtaaacatgcaaacctagtagat
cctggggatgatgaaccacaagctcagtaagatgcacatgtacccgcatgcacatatggg
cacacatgcacgcccacgtacacacacttatttatttataggaaattcatagctcaaagt
tcgaagccttcccagatccatcactgccaaccaagaaacagaaggtagcccagcctctcc
agccgccccagtcgcccaagctacccaagctgtgcccccagctgccctgtactctgggct
tcaaccttgcagcttctcatcttatttcaaaatgttctgacatgatgcggccagtcaaat
atgactgattagtgccctcctgttatgctttttaaagtgatatacatcttaatttggaat
acatataagaagggcttttattttaggtcttgatgagatttttttttgaatcctgttttc
acatcttatcattcctgacagagttcaaagctcaagggcctggtctttgattcagtctag
ctctgcagaataaattccaagtgatctcagaagaaaaaaaatttttttttcgtttattat
ggtggagccttgttctgctgtgtttctttgtttttaagcactattcagtcctggattatt
atgatgtattgggtttgacagggctagaatgttggaatagatgaaatactgcttgggaag
tcattgagcaggtggaaaatgccatttaatccttctaacgggagcagctcatggtggtat
tgaaaaaaaatatagagacagtaaaccaggttaggagagcagaataatagcaaacgtctc
ctccgttcattgtgaggctgccccatgcagcttcattttacactgagccagtccatgccc
cccaaatatttctccagtggttgtaatgaattgcattgccccttggttgttccagtgccg
gtgttctgctgaggagacatatggtttccatttattttaatgcgtcttcgacatcaggag
aattgctgagacagcagaggaaagtgcttacaccttggaccgcagccagagctgtgatta
tttacgtgtagtaaggactactctttcccagtaagaaacgctgtggtctcggggttatgc
atgtcgaggttctaatgaagccagtgccacgggtttatgtgttctgacaataactggtcc
gttagcggcggtgaaatgtgtttcttgagcaccaagtttcagggtttaattgcacatgtg
agagattaaggaaaccagctggggaagagccaggacttgttttctcactgatgataaagg
aacagcatcaccaagatactactgtgcacatgcaatatctcccatctgtgattcaggctt
ctcacaaaggtaattatttctcataatacacctatgtaatacaattcatataacatatca
tagtgactattagaattcggatttcagtgactatatcattgggccttttattattttgca
aatattaagaaaggaaagtattttcacatttttgggtttttttgggtgcttcttgcttac
aatgaggaagcgtcctttaaaaaatagaagacaaagtcttcaataacatttgttccgtgt
gtgtagtaattgttaacattactctgagaagatacaaccattccctagaaatttgttata
tttcgtcagtaaataaagatagcggggggggggggggaggggactaatagcattgtaaag
tttctgtaaaatggttctccatggagacaaagtcatgtggctagctgaataaatgaagca
ggaagagtgaactccagcctctgctcatgctttgggtactcctgagtggaatggcatacc
tcaattttgctcgttactttattgtgcctcaaatattttgctggcatattttaatgccgt
gtccttaggcgatttataacataaaggtaaaactgaagcagaagggagattgtaggtcag
gtgtggaagtagtgagcctagactcatggtgcaagacaggtagatgacttggtgggaagg
gaaaggcaatgaagtgggaccgGAAGGCAGACACCTCCGTTAGtgt
Primer
(+)GCTGACCTTGCAAAGACCAT
(+)caccTAACGGAGGTGTCTGCCTTC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.