Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm666 ]


Position: chr1:84,545,385-84,547,922 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Dner(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCTGAACATGAACAGCAGCAaatgtacagaacagagaagtacacttgtaggaaagagaag
agagaaaaaatagaagtccacactaagaccagaaatgcaacatctgcaagtaaactgtgg
tgtttatttgcttgttttgtggtttgtttgtttgtttgtttgtttattgagacaggttct
ctctatgtaatcctagctgtcttggagtttaccgtacacaagactgacttcaagctcaca
gagatccttctgcctctgcctcccaagtgctaggactaaaggcatgtgccattataccag
cctgtcaattgagttcccatcaataccaggccataatcatactaaataagaaattgcaga
attaattgagagaaaagttaagatttctatttttttttttttttgatggaatggtgtttt
gaattttggtctgttagataatttggttttgccctttgagttttggggacagtctgctgt
acccaggctatccttcaattcacagaagtccttatctgagctgcaggtgtgaaccaccat
gccccacaatgagatttcttaggaatcatagagaactataggaggttgggactttgagtg
tactatagaggaaagcactggtctgtggtggggaggggaggtggggattgaaggaaacct
gatgttgattggttcccttctatctgttatgtggctggatgatttccctactgaggtcta
aaaccctaatgaaggcaactctacaaaggctacccagggatctgttaacacccctcaagt
attagttaggatggcaaataaaatttgggcttccccatcccccatccctattttcctctc
cttcctccccatcctcccaacacaaatgcacacattctgctcttgctgctgcctaggggt
gctcattaacacagtaagaaagtgttctccaatcattacagggcctcttacaatagcccc
ccttggtgcaaatgagaagtgaaggagggcccagccattatccttggaatgcggtggtca
agcatcaattaaagtgcagggaatgactggcttcaggccattagctgtttattttactgc
cttctctaaggctaaagctaaagagtcttaaatggactttgtagttaacacctcattggg
attaatagcaaaggggatttgcacatctcactccagtcatttggttcaagatcattttcc
ttcctcttaaagagaacgtgtacatggaaaataaaaattccaaccataaattcttgagct
gtgggtgctcaaaatagattgcaccaagtttgcctgttaaggcttggagtcatttggcac
aagcctaaaacctataaatactgttctgaactcaggaagcctcgaaacatggaggttttc
aaatagcagcttccagctgcaggcctaaggctctggtattaactcagatgctgagaaagc
cagctcacaatgaccatgtcttgtgccatagacacggggtggaatggcataactgtatca
gcctgctaggaaaacaggctgggctttagtgcaaagcataatgggtaagaaaggattctg
tctgcatctgtgatccaagacttggagactgggccacaaaactgaagaaatcaaatcttt
tgacagtttagggcctggagcaaagatcttacttttggatgtgagctccaggcaagatca
agttcagggctaacaaaacaagactaactaatacccctggaccacaggaattcagctgtt
cttcagtcctgttttatgtagaatcaaatctagaccagaaggtaaattggcaggaggtac
tggaaaagctctttcaaaactgtccccctgtaagggtctgaaaatcactgaaggaaaatc
ttagattcagatagtattcgaagacaaagaatgtttactctgcagaaacaaccaccatgc
aagggtcaaccattctccaaaatggcgaccaccaaacaaaggcatgcaggccttcttaca
gggaaccaggggaactctctagaaggattaggtaatctctagtgtgactggtaggggcca
aagcagtgacactagtataactttgattggctactaagttagttcttctatatttagaaa
gtgggttctgtaatctgaaatttcattggtgggtgctggggagatcacaggggtcaggtt
gtgattggcttgtgccaggtggtcagtggtctgcattcctatgtcatgaacatttaagta
tgggatgagataggactgcccaacacagatagcccatcctgggataggatattttcccat
tcttgtggttatccccaggctgttctttgagagggggttttatgaccttgtttctggatt
ttgtggtctgttcctggagctggtgtctaagatctttttgaaatcagacctggtccttca
atggagacaactggagtttatgttgttcactccatgtgctatacaactgtgtcacatcca
gggaagaacctggcaaccatcttttcgtcttctctacacaaaatttttcgtcagttTCTA
CCAAAAGGGTTGGTGGTc
Primer
(+)TCTGAACATGAACAGCAGCA
(+)caCCACCAACCCTTTTGGTAGA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.