Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm664 ]


Position: chr1:12,604,893-12,607,403 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: A830018L16Rik - 4932411L15

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GTGTGTTGAGGGACCTGTGAtcccattctttggattctgatctctgacacagcccagttt
gcctcttaggcaactcctagagctaatctaaatagtgccaacagattccaggaaggggga
tggtcaatgtttcccagaggaaggcagatgacatagtaagacagcttaaaaagggtcaga
gcttcaccaaaatttcaaaactattccatgagagatgaagacaacattttctttccctta
gaatcaaacagtaacaacaataacccagccctaaaatagcatgttcgtcacctctgttag
caaggactttcttccctcggctccacaacatgggaaagaaaacacacacgctgagcctat
caacttcagtgggtgtgggctgccctgaggagacctccttgaactcctcatccatcttct
aaaagtgctgatcaaaaagcataaattcctattaaacatgataacgctaatggatatatc
acttgcctcttaacattaggttaattcatcagccaagaacacaccctgacaatggttaat
agaaattataaacggggcttttattgaagcagcactacatttaaccatagataatacagg
tgattaacttccagcactagctcaaccagaaaacatatgcccctgcctctttgccaactc
aaacatagttttattggatgcacctgaatttaagctcctatttagtactcccttttaata
gcttaataaaaaccagctataacctaagccgtttatgtgtgtatgtttaaaactcagaaa
aacgccaccagacaaactgatcagtttatagaaaaaaatagaggcagagtattgtaatgt
gaagaagaagaaaaaaaaaaaaaaccctaaattaccttggtcctttattgtgaattatgc
tcacaacccacttagaacatctgaggccaggcgtatcaaggcactctgaagggccttcat
tcaggtctggcctttcttctctcaagctcaggctgcttgttacaagagcactgggattag
aactgaaggagtttacctagaagtaagcattcttcccagacatctgcagtcattgaggtg
gagacctgctccgagggcccagactggacccattgtagtctggcctctgggtcctgtctc
tcagctgccactgcactgaagtgccaggtgcagaaggctcctcaagaggagaccattgag
aagggaaccggtcacggagattacgaacttataattatacctctggctcctccttggagt
caatgggtgcttcccaattcttttctctttattgctgaaagtgctggcctggggactaag
gctgattatttatatctttccctctagcaaatctttgtctcataattagttagtttggtt
ggtttttacttctttgccactaataagagggaaaaaatggtgcctctgaatattttacag
tggaaaggtaaagtgctgagtcagcgtttttaggcactgccccgagcagcacatgcgtcc
acttgctgctttactgttttgactgagtgttgtgtgaaagaacttttaatttcttttccg
ctgctttcctgtgctccctgacacagacttacaaagctctgttttacttctaaatgcctc
ctccctaagcacaccatcatgcttgcaatcactaatgtggcatacgttttgagacaatga
aataactatttttacaagaacttatgatatgacaagatactaattaaaagcagagcagtg
ctttgattcccctattagaggtgaagtccaaagtgttttagctcaatggtttcactgcta
tgcaatagttaccaaagactgtgtgggcatgggagtcatggatgaaaatcctgcaaagca
caaaggcgtctctgggatgctggcccctggaagagactgtcttccaaaactcagtgctat
aaaggaaaaaaaggacttagatgcttaggcacgaatgagcaaactaatcataaaccgggc
acggtgttttgcttcaactgagaacaaatcatttcacttagcttctcaggattcaccact
ttgccaagttttcattaggatcggaaaatgtcaagtcctaacgtcccacagatgactgcc
atccacaccagtaacatcttaaaaagagatcgagcatttctggaagtgttaaagccatgg
ggaaaatatatttccatctctttgttctctttctccaagggaagcagaaaagaaaggaag
gaaggagggagggagggatctagtgagactactaaaatcatgcaaatagccaagcatatt
ttctaaatctttgttcctttataaatattaattattctctgaagaaattggcttgctcat
aaaattatcacatgtatattgtatttaaaatgtattctgttaaactttacaggttactgt
aaagtttctcttttaaaacaataaataagaaactgatattatagaattttctggattcca
tgtttctttttgaaatgtttctgagttAGGAGAAGCCAACCAAGGTTtaaa
Primer
(+)GTGTGTTGAGGGACCTGTGA
(+)caccAACCTTGGTTGGCTTCTCCT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.