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Mouse element [ mm663 ]


Position: chr1:11,016,121-11,018,625 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Prex2(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
gACCAGTGAGCCAAGCTGAAAGAgatatgccctaggtgaacttcgggcagaaactggaag
gagcattctgtagtttcacgaggtcactggacctggctttccttacctgtttctctttat
tcctggtttggatgaaatcataaagggcaaacagatgtgcaaactgctaaaatggtaagt
catggtatcaaaaaacaaacttgtctttgaagaggaaaatagaacagcttgaaaataaag
taagccatgtgggagagcaagcctacattccgagcacttgggaggcagacccaggaagag
ggccacacatttgaattccaggtgagccacaattaaaaagtgacgcctggtctcagcaca
cccctttccgcacaggaagggaaaagaaaaaaatgaacttgaaatttaaaggcactcatg
aattctctcatgagaaatgtctctgtgaaaaagacatggagtgttgtatatgcttgtcta
atctacagaaatggcgttataagtcagtcatagattgtctcaccaggagccctataccag
gatgtggcagggcttcctcactttcaaacaagacacttcatttagttctggatgccatct
cctagcagccagtggtaagtaactgggacactaaaaatatcttggaacaatattgcaggc
aaagcattgtggaacagaaacggtttacaccttgagttacagcagctagaccaatggcct
ggacaaaacttgtctgcagaggagaaacctgccagcaaataagcagcaagtgtacagagg
gaggtttccttctaagatcggtgaaaatggaagcattcctttcagatgattttctttgtg
aatatcaaaataaacaacactagaatgaacacctctaccatggttacttctcagtgactt
agaatccagtggaggacggaggacatctccacagaggggctgtcagccaagatcgatttc
atgtcactagatctctgaacgtttataagacagtcttgctctttaagatctgcaggaagc
agatggtctcagctgcatgtacataggagtcctggagccaggaagccctctgcttgagta
gggccatgtgctaagaggttttattgggggttttatgggaaaggggtgacttggttgtaa
actctatgcctctgaaataatcacagctactagagattggattgaatgtttgtccttgcc
tggtgctcagctacacactgtgtgcatgtcagctgcttcgctcattttggtaaacgtgag
tgagaagccaggaagggtgggttcactgtaatccctgtcccgtgaaataacttgagacaa
gctaagacagttgctagctgaataactgtgaaggttaagtatcgcctccatcctccttcc
tcccatttaaaatccgaacaaaaaataacagtgcctacacacagaaatggtttgttgtta
tttaaatatttatttttctttcttgtgtatttgtgtgtagatgggtacacaagagagccc
tttgcagccataggcattgagtctccctgtacctggagttaggcagttgtgagttccccg
gtgttggttctgggaactgaagcctggtcttttgaaagagcagatagtctcttaaccact
gtgaatctttccagccagtggcatgactcagatgtctgtttgccatgtagtggctgttta
attaagcttgccatagtttaatgcttttaaaagtggcttcacaaatcattttgttttctt
cactacaacaccatgtttcccccaggtagtgacagaaagaagggaggggggacacttagt
gacatgatatggctaaatactagaacctttactcttcacagagaaatattttaaaagatg
tgcactgcttttgggttttggcagagagccttggagctgacaaacacatgagcttttcat
gtggaagaatggaggggtgtgttgtatctctgcatgtccccctgctgcagtatcctcact
aagccagcctaaaatgctacccatttagtacaccttttaatccacactcttgaaatggaa
tggtttgatttttgacagagtgttcttatggataaccccttacttacagccttccatcat
cttcatttgtcttgctgattattcacaaatcttaccaaatgaagcttaattttgtcagaa
catcaccttcccttactgtcccacgtggagattttttggaatgattatgtttaagaaagc
taggaccccaaactttatttgacttcacaaagccactttattaaactttatttttttatc
ttttctctctaatcccttttgacagtattgaaagatatttacaggatagttactttgcat
agactgtggagtggcatttcttttaaacagcaatattggctgctaaaattttaagtttgg
gtactttctcaaaaccaaacaaatatgacttttaatgaaaacagattctgaatctttatt
tggtatctgcatcgtatttggtatcTGCTGATTGGCTTCACTTTG
Primer
(+)cacCAGTGAGCCAAGCTGAAAGA
(+)CAAAGTGAAGCCAATCAGCA


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