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Mouse element [ mm659 ]


Position: chr8:91,526,103-91,528,596 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Cyld - Sall1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGTGGTGAGTTTCCCTGGAGTCTGTATcagggactggtgatctccaacaagtacttgagg
ccctgtcatctggagactcctctcagtcctgggttcccaggggacttctgctgtgactca
gaagttaccagtctgtgtttactttcctcagtaaacaatgagggaatccactgtccttca
ggaagtctgggggccagcaggaatcggagctttatccatccttgttctggctccacagga
agctgccttgagccaggacaaggttaaagccagccacctaaatgtcctcttaaccccagg
gactccatcttcacctgggtgacaggattcagtttggttctagccttagacatgtgctct
gtaacacagtccagaactcagatgtgggtacaacttgacttgcaaagtgagaggccagga
cttgctgtgtggcagaggaggctgctgctctttaaccacagcacaagccgtttgctgcct
agccagaacagcctccttcccaggcgcacctgctcaaagctttctgactttctgtgaccg
aggagaatgaagttggagaacccactgtacagatgggattgttgaggccagagaattgaa
cgacaagggaaagacaggactatggactctatacttctggaagtttgggaaccaggaagt
tggcctcatgcatttgcaatgcacagacactgaagtgcttccgatgagccagatgtccag
gagtctcttcaggacaacaccatggtccacaccatcgctcaggacctcaaaagaagacac
acctggatgttgatacatttagcacacgggcatcgacaaatgtacttttaaaaagtcttc
cctaggggctctatgagagatggctctatggttaaaagcacaggctgctcttctagagga
ccccgggtcagttcccagcacccacataacagctcacaactgtctgtaactccaattcca
ggggtccggacacacagacatacaggcaaaacaccaatgcatataaaataaaaaataaat
cattttaaaagtctttcctttgacccagcattttttttttctggtagtgtttttttgctt
tgttaaaattccttgcccattcacttatgcctaatctaaggctagcccaaatcatcccaa
agggaagtggctatggcttaccacctgtcagtctaacctaacaagaaggtactttgtaga
ttagtctggacctgagctttgtccttgccttcaaatggggaatgtcaatgtctccttttt
tcctgtcagcagtgactggggcttccttccctgcctgagccaccttggtggtatgtgtcc
cctcctgtaaacagctgggccctccttggcagctgctgccgccgattagtaaattacaag
gtcaagattaagaaaggaatggctaaagaataaaacctttagtcaggcaacttgaagtca
ggctggtacaatgaacacctgttgagaaagcccattattaggaactggggctcggagcgg
aaagagcactgtgaattaattttgaacgcctcgcagaattttgcataacaaatgatctcc
gatgggggtgtccagggacttgagcttgggggagggggaggacagatttcatttctagca
aggtaacataagcctggctaggacattaaaatctaccattgacggcccttgtctgtatcc
ctctgtttggagcagattgtgcgtgctaaggttaccgtgtattatgcttctggggaaaaa
agagtaacaattgatatcaaaatcttttcaaagaagttgagaaagcatgaggtcagagac
tcgtgactcccagattgttaaatcatttatttatgtctgtgtctgtgtaaatggagattg
ggggatatgttttgtgttttaagcagcctgtgttttatttttcagacacacactaccttt
tttgtaagacaggaagagtgtaatagatttgttaaaaatggattcgcttgctgttagatg
acctttgtactttgtaatgtcatcaggactgagaactaaaagttaggcattactagtgct
gaggtgctggggagttgactgtgggggtggggtgctggaggcactgactattaagcagtt
tctttctttcctgaaaagaaagagacttcaactaaaagacatggcatccctacctgtctg
ccaagcccccccctcccccccgattaaatctaaaagcaggcatcccatctgcttgcccaa
atgaagagtgtaatattctactaactactttctattatcgctcaacttaaaggtttcttg
ggaaaatgatcctcaattcatttgaagtttgtctgccacacaaaaggaagctccggaaag
ctcagtgctgtgcagtgaagacacagcacaccagctgactctgagctgtgttctcaacac
ctgacagttaatatcacaggaatgttcatagcggtagactcccattttttcgtgagtcag
aaaaccTAGAAATATCCCAAGGAGAAGGGACAAC
Primer
(+)TGTGGTGAGTTTCCCTGGAGTCTGTAT
(+)GTTGTCCCTTCTCCTTGGGATATTTCTA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.