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Human element [ hs648 ]


Position: chr8:105,880,860-105,882,147 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LRP12 - ZFPM2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CATGGTAAAGGATGGATTTACACAGgggactttctctttttcctcagtgtaactatttat
gtattgcttaatttaaagattacccttggagatagtctacagattgggatactgtatttt
actcagtttacatttagtttcaggatgcttgcattctatgaaatgtatttcaagactccc
taaaaagacaaaatagacactctttaagcagtttacaagatacagatctttatctcttac
aaaggaaaggaaacaaggaagctgtaaataataagttctgaatagaaatgacataaactg
cctaatcaatgtcttccagaactggcaagtgacacctctttgttttttgcaaataaaaac
cttcttcccatcacaatataaaccattatctctgcaggcaaggtatatttagaaatgtac
aaaatgtacatttcctgccagcctctagatcagtaggtggagatctaaagtcatgcaaat
attacagtaaatgcaggcaaccaatttctaattattccatatcagcagatttgtgaggaa
tataatttattaaaaaagaacagtttatgatcagcagaccttggttatgactgtttagga
attcagtgcattttgatctaatcacaaaatcaaaatattcatgaaacacaatgatatctc
cccaaagcagccgggcagccattaattttgaaattcgggtaatttattaacacttatctg
aagctgtaaaagcttacctctgtgtttgtaatacggagaaaagtgaaagcagttttaaaa
ctgattcctaatgatttataatggtttgctgtaatttgagccagaaattcaattaaaatg
tatgtctagttttgtttcaagatctttagttaaaaattctattaaaattctatttccttc
ttgcattaaatgtatctgttatctgcatatacaagaaatataagaaaattctatcattta
ttccccagtccccataaatgctttaaaaagcattcatttttatttcataattctgctaag
gtagcatttggaatttatatacagtagaagaagaattactgtatatgccattttcttggt
aaggaaagaaatctaacactgaatactttagggacaagtcaagtaatatttgctacttta
tcaaactagaagaaaacaaataaaataaaacagacatttttgattccaaattattaacct
aatggtatgtctctgaggtttaaaaaaaacatataacattccagagaaaggagcaggagc
cagggagAGGTGTGGGGAGACAGATGTT
Primer
(+)CATGGTAAAGGATGGATTTACACAG
(+)AACATCTGTCTCCCCACACCT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.