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Mouse element [ mm643 ]


Position: chr15:63,506,392-63,507,808 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC432958 - Gsdmc

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AAATTCATGTGTCCACCTCTtagccatcctgggtgcttacctatccaggacctaaaggca
gaggaaagagggaacagatggttgtgaagtacctggattgggattctgctggcaatacac
cttactgaacactcagcacaatcacacaggacaaattgccttatggttcacactatgtgc
aggggaagaaaggggattcagagagacaaggggagaggcaggttggaaaggccagaccat
tcttcataagccccacctttctaagccaccctcaactttggccattgggcttacacaggg
ggaaagaatcagaatgtagaccagaccgtctgtaggtgccatggaaaatattttctaagc
atgctacttctcagtggcatggaagttactgtaacaaccacgatactgttcctgaacaaa
aagaacgtaagaaaaactgttgggaattaaactgcagactaaataaccacattcttaacc
tttttaaagccaaacagcctacaacgatatcaaattctactcgtgtttctacatttttcc
acccaagttggctttgtaagttgttggttttatcaaaattgagtcagggtgtgttcaata
caatgttgaattcattggggaggtggggggaggaaaaaaaaaaaaaagcaaaagaaagcc
cttgcttcttcaataccgggagcttacaaagacacataaaccatgaggaattccaaggac
ttaactcagaagccgctctgcaaatacatggcttgaacaaagggccaatgttcctttcag
aaaagagtgcggggctggtttccggcattttctttaagtcattaggaccgtgccaacaaa
caaacatatactggtccccagagaaagactttcattcatcggagcttacaagagtttgat
tattgggacaggggtgctccagggcacgtgcctcgccagcctgcccccaaatgtacagat
ttgcttaaagggttttattgatggtggctacagacagatagagcctgtgggggagctgac
agcccctggacactaacggattagtgtcatccaaaccaacacactgtcctatcagagaca
gctgaaggctcggccttgttcctcaggaatctgtttctgtaaacatgcaaaaatatagaa
cagcacacttgtgtttagtaggcttgagattccctttactaggacagtcaaagggttctg
aagatttggaatgaaatgtcactgggtgattttagatgatgtaatgtttggatctttacc
cggatacatgtttcagcttttaacaaacatgaaaatgaacagtgtcccgaaaacactggg
gcattcgatgaaggatgaagccctttccaaactccagctatccacacatcatcttaggtg
gctttgataacctCTTGGCTATAGACCCTCCATctTt
Primer
(+)AAATTCATGTGTCCACCTCT
(+)caccATGGAGGGTCTATAGCCAAG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.