Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm640 ]


Position: chr3:35,239,328-35,240,939 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gm3143 - Gm6639

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
acCCTCAAAATACAAGGTTTGCtttaaatcagcaatacacgtattttccctaattatcta
ggctttcttgatgccatttaaaaaacaagtgtctgccccattctcttcatccctgtccca
ttcttcctaaaaaccatgaagtaattgttctgtgcactatagcactcacgggtgcgccaa
aaggaaaagaaagacaaaagaacccttcagtcctgagactgccagcggcgtatgcaaacc
ttgagaaagcaagctggtgtgcaagaaaaccgttttcatcactagctctaaccacccgcc
tctttcttaagaagaggatgaggcccacaggataataaaaggctgcggaaccacacaaaa
gttccacatgtacaacctcctgagtggccttcaagggggtaagggcaggaggtgggcgga
ggacaggctgagagctaggcagaaagccctgcttctggaaaggcagctcaccttacaaaa
acataattcactctcggggcccctgctccgaagatcttgttatcagaaggaaacaacaac
ccaataattgtaacaacaataataagctgagccctagcggtcagggtttctgcggtgacc
cacgggattgcaggaggggagtctgtgaagcgcccttagtctggggggaggggacagagt
ccggcgcttcagcttctaagtggccacagctgctcctgccgcactcgggccaggtccttc
tctcccttcacagccccccaatccaaaaccagcactaaggagccagactggggggggggg
ggttcatccgcagcaagcaaaagaggctacccacttaggaagaaactgtggggctggaga
gcggagcggaggctgggggatctgcagggagggaggcacttcattttaatgcgccacaga
cagagtgagatctgatactggcaaagtttcaacgaagatgggggcgagggggcgggagga
gaagaaaggactctttgactgctcaatgcttgtgagttttcctgaggaggagcataaggt
ccagtggacattctgggaataataatgaggaacacacagcatcagaacaccaaatgaggc
tgacgatgattcaacctcctcgtgcatctgcgcccacaaaacaggacttcaattaaacaa
ccttgcagatctgaacagaagagagagcagggggatttttttttaaatgaaccaagtccc
tttggtcaaaattaggtgtttgtcctaaacttcaattcctaagctgtgaacctgtgcaga
gagagggagctggccggtttctttccaacagtttttgaaccagtgtccttcccttagcga
ggcacctctacaaattgtttcaaccaggcggagggtaagagaattctaaatgaagtgctt
tttccgtttttgtttggttttgttttgctatttcaactggcacaaacacattgatataca
cagaccttgcagagtgtggcatcaacgctgtatgtttacaaaaaacaaacggaaagcaca
cccggcgaaaacaaagacccgtgcctcaaatcaggtcacacacagcaagaaattttacct
gcaggagtttttaaccgctgcagtgaacagagGTCATCTCAACCCTTAGCTG
Primer
(+)caCCTCAAAATACAAGGTTTGC
(+)CAGCTAAGGGTTGAGATGAC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.