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Mouse element [ mm639 ]


Position: chr3:35,001,233-35,002,696 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gm3143 - Gm6639

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTCTGCTCAGACTACCCACTggtgtttgccaagcccaaggcagagggacggattccacgt
cctctatggaccacaatgccggggagccgtatctgcctgagaagcgcccgaaaccacggc
taaagtgtccagagctctgtaaggctgggatgcctttttacagccccttctgctcatgtg
atgaaccaatgtaattttaaagaaaaatttaatccatatgtttttcattaatctgtacta
aactcatcaaaatggtgttttgtaagagtgatttggtgccccagaagtcttctgaggctt
ctgtaacaggccttcataatgccggttctctttgaagcaggaattgtgttttgccaacag
caaagaaattcaaacccccaaagggtttggatcagtttgaaactccaggccagaggactc
tgtggggttctacacttggcaaactgtgctctctcccttctgactttgaaataccttatt
tccttcccacaagaaatgttctatttattgtttgcctaaatcgtgtgttcaaaacgatcg
tcaggcttcttaatgtatgaaacttatacacgaattgaaaagcaggcttcgggactaatt
ccttctcaggctctgtcattgggttgtccttggggaattttctttaattagtctgtttcc
tgactctgcattttcttgcgacttgggctgaccaaaagatttaccacagagggtgaagaa
gctggtaccacccagagaccaatgcagagcaaccacaggtttcgccccagggtggcccag
cagagacatattttttgatatcctatgttaatgtactcttatactgatgttgacaaccaa
aaattcaatgcagatttcacataactccgtggcctgtgccaggagcaatgtaattcacaa
ttgtctgtgtttgctaattttgtggtggtgttagtttgtgctccagtgtttaagggaggc
atgcgtaagctcactggggcttttttatacaatgtgtgtgagagagagagagaagaagag
aaagagttgaaaatgcaaacaagacagtgtatgcccgcaagttaagcatgagacagttgt
ggtcctttgtccttcctgcctctgggctgtgaagtgggagcgccccctggtgaaacttta
aaatcactgaagattcaggatgcgtgacatccagatttcttcctaacgtctatgggtttt
ttgtttgttgcttttttgttggtttttgttgttgttgttgttgttttgttttattttgtg
tgaaaaattaacaatttgattaagtttagaatgaaacgttaaaaaaatttaaaaatcatt
aagtaaaacgatctctttaggtaacagaaatgaatatttgttgtctataccaaagtgtgt
ctgtttgtttgccacttttccacatcatccacagctgccatttccggctccatctctgag
gTCACCCTAAGACTATGGTCGtat
Primer
(+)TTCTGCTCAGACTACCCACT
(+)cacCGACCATAGTCTTAGGGTGA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.